2016 RNA sequencesfor cyanobacterial bloom

공공데이터포털

The data contained in this worksheets provide sequences submitted for public access, analysis for RNA sequences generated in this study. The data and analysis are for a manuscript "The trait repertoire enabling cyanobacterial blooms assessed through comparative genomic complexity ". This dataset is associated with the following publication: Cao, H., Y. Shimura, M.M. Steffen, Z. Yang, J. Lu, A. Joel, L. Jenkins, M. Kawachi, Y. Yin, and F. Garcia-Pichel. The Trait Repertoire Enabling Cyanobacteria to Bloom Assessed through Comparative Genomic Complexity and Metatranscriptomics. mBio. American Society for Microbiology, Washington, DC, USA, 11(3): e01155-20, (2020).

HABqPCR DataSet

공공데이터포털

This data covers reverse transcriptase qPCR quantification of microcystin gene activity during the summer bloom seasons in 2015, 2016 and 2017 for08/20/2019 Harsha Lake in Ohio. This dataset is associated with the following publication: Wymer, L., S. Vesper, I. Struewing, J. Allen, and J. Lu. Possible Antagonism between Cladosporium cladosporioides and Microcystis aeruginosa in a Freshwater Lake during Bloom Seasons. Life. MDPI, Basel, SWITZERLAND, 12(5): 742, (2022).

HABqPCR DataSet

공공데이터포털

This data covers reverse transcriptase qPCR quantification of microcystin gene activity during the summer bloom seasons in 2015, 2016 and 2017 for08/20/2019 Harsha Lake in Ohio. This dataset is associated with the following publication: Wymer, L., S. Vesper, I. Struewing, J. Allen, and J. Lu. Possible Antagonism between Cladosporium cladosporioides and Microcystis aeruginosa in a Freshwater Lake during Bloom Seasons. Life. MDPI, Basel, SWITZERLAND, 12(5): 742, (2022).

Dataset Cyanobacterial Microbiome

공공데이터포털

1. Accession numbers of raw RNA sequences, generated using Illumina sequencer, 2. water parameters, and 3. derived data worksheet from the raw RNA sequences. This dataset is associated with the following publication: Wang, K., X. Mou, H. Cao, I. Struewing, H. Allen, and J. Lu. Co-occurring microorganisms regulate the succession of cyanobacterial harmful algal blooms. ENVIRONMENTAL POLLUTION. Elsevier Science Ltd, New York, NY, USA, 288: 117682, (2021).

River-cyanobacteria-datasets

공공데이터포털

Sequence data are used for cyanobacterial community and toxic species analysis. This dataset is associated with the following publication: Linz, D., N. Sienkiewicz, I. Struewing, E.A. Stelzer, J.L. Graham, and J. Lu. Metagenomic mapping of cyanobacteria and potential cyanotoxin producing taxa in large rivers of the United States. Scientific Reports. Nature Publishing Group, London, UK, 13: 2806, (2023).

River-cyanobacteria-datasets

공공데이터포털

Sequence data are used for cyanobacterial community and toxic species analysis. This dataset is associated with the following publication: Linz, D., N. Sienkiewicz, I. Struewing, E.A. Stelzer, J.L. Graham, and J. Lu. Metagenomic mapping of cyanobacteria and potential cyanotoxin producing taxa in large rivers of the United States. Scientific Reports. Nature Publishing Group, London, UK, 13: 2806, (2023).

EPA-Generated Data for Banerji et al. Ecological Role of MC

공공데이터포털

Data used to generate Figures 2, 3, and 4 as we ll as Table 3. This dataset is associated with the following publication: Banerji, A., M. Bagley, J. Shoemaker, D. Tettenhorst, C. Nietch, J. Allen, and J. Santodomingo. Evaluating putative ecological drivers of microcystin spatiotemporal dynamics using metabarcoding and environmental data. Harmful Algae. Elsevier B.V., Amsterdam, NETHERLANDS, 86: 84-95, (2019).

EPA-Generated Data for Banerji et al. Ecological Role of MC

공공데이터포털

Data used to generate Figures 2, 3, and 4 as we ll as Table 3. This dataset is associated with the following publication: Banerji, A., M. Bagley, J. Shoemaker, D. Tettenhorst, C. Nietch, J. Allen, and J. Santodomingo. Evaluating putative ecological drivers of microcystin spatiotemporal dynamics using metabarcoding and environmental data. Harmful Algae. Elsevier B.V., Amsterdam, NETHERLANDS, 86: 84-95, (2019).

2016 Harsha EPA Dataset

공공데이터포털

(1) qPCR and RT-qPCR for cyanotoxin producing genes, and (2) some water quality parameters. This dataset is associated with the following publication: Duan, X., C. Zhang, I. Struewing, X. Li, H. Allen, and J. Lu. Cyanotoxin-encoding genes as powerful predictors of cyanotoxin production during harmful cyanobacterial blooms in an inland freshwater lake: Evaluating a novel early-warning system. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 830: 154568, (2022).

2016 Harsha EPA Dataset

공공데이터포털

(1) qPCR and RT-qPCR for cyanotoxin producing genes, and (2) some water quality parameters. This dataset is associated with the following publication: Duan, X., C. Zhang, I. Struewing, X. Li, H. Allen, and J. Lu. Cyanotoxin-encoding genes as powerful predictors of cyanotoxin production during harmful cyanobacterial blooms in an inland freshwater lake: Evaluating a novel early-warning system. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 830: 154568, (2022).