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Estimates of microcystin concentration and content using an enzyme-linked immunosorbent assay on samples collected from experiments on cyanobacteria in the Great Lakes and field data from the Mississippi River
From 2017-2019, the Upper Midwest Environmental Sciences Center (UMESC) analyzed microcystin concentrations in samples collected from three different studies. The first study was on the movement and distribution of invasive carp (Bighead Carp, Silver Carp, Grass Carp) in the upper Mississippi River between lock and dam 16 and lock and dam 19. Samples were collected from May through October of 2017 and 2018 from backwaters, impounded areas and main channel areas in this reach of the Mississippi River. The second study was a nutrient and metal amendment study performed on natural phytoplankton communities from Lake Erie and Lake Michigan. This was a laboratory study where natural phytoplankton communities were incubated for 72 hours with amendments of ammonium, phosphate and metals (iron, zinc, molybdenum, nickel and manganese). After 72 hours, communities were sampled for microcystin concentration (among other metrics not reported here). The third study was a nutrient diffusing substrate study, where periphyton were grown on suspended substrates that leached nutrients or metals. After two weeks of deployment periphyton was collected from the substrates, diluted in purified water and then analyzed for microcystin concentration. Microcystin concentrations for all experiments were estimated using enzyme-linked immunosorbent assay (ELISA) test kits. We used a Bayesian method to calibrate the absorbance data from the kit and report here on both the microcystin concentrations of the samples analyzed, but also report the raw absorbance data from both samples and calibration standards so that others could recreate the microcystin analysis using other methods if they so choose.
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Estimates of microcystin concentration and content using an enzyme-linked immunosorbent assay on samples collected from experiments on cyanobacteria in the Great Lakes and field data from the Mississippi River
공공데이터포털
From 2017-2019, the Upper Midwest Environmental Sciences Center (UMESC) analyzed microcystin concentrations in samples collected from three different studies. The first study was on the movement and distribution of invasive carp (Bighead Carp, Silver Carp, Grass Carp) in the upper Mississippi River between lock and dam 16 and lock and dam 19. Samples were collected from May through October of 2017 and 2018 from backwaters, impounded areas and main channel areas in this reach of the Mississippi River. The second study was a nutrient and metal amendment study performed on natural phytoplankton communities from Lake Erie and Lake Michigan. This was a laboratory study where natural phytoplankton communities were incubated for 72 hours with amendments of ammonium, phosphate and metals (iron, zinc, molybdenum, nickel and manganese). After 72 hours, communities were sampled for microcystin concentration (among other metrics not reported here). The third study was a nutrient diffusing substrate study, where periphyton were grown on suspended substrates that leached nutrients or metals. After two weeks of deployment periphyton was collected from the substrates, diluted in purified water and then analyzed for microcystin concentration. Microcystin concentrations for all experiments were estimated using enzyme-linked immunosorbent assay (ELISA) test kits. We used a Bayesian method to calibrate the absorbance data from the kit and report here on both the microcystin concentrations of the samples analyzed, but also report the raw absorbance data from both samples and calibration standards so that others could recreate the microcystin analysis using other methods if they so choose.
Microcosm experiment data of microcystin-degrading bacteria in Lake Erie source waters and drinking-water plants, 2015-18
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In 2015-2018, the U.S. Geological Survey (USGS) in cooperation with the U.S. Environmental Protection Agency Great Lakes Restoration Initiative investigated the biodegradation of microcystins in source waters and sand filters from drinking-water plants in the Western Lake Erie Basin. Four source waters and three sand filtrate samples were collected from the intakes and sand filters of Lake Erie drinking-water plants and transported to the USGS Ohio Water Microbiology Laboratory, where investigators set up microcosms to enrich for and identify indigenous bacteria capable of degrading microcystins. Quality control samples were set up in the microcosms to check analyses and included positive controls, negative controls, and replicates. Microcystin biodegradation was quantified by the disappearance of the toxin as compared to control cultures in microcosm and microplate experiments, and by the presence of a gene within microcystin-degrading bacteria that encodes for an enzyme involved in the initial steps of biodegradation. Bacteria were isolated from microcosms enriched with microcystin-LR (MC-LR) and MC-LR concentrations were measured over time by ELISA (table 1). Isolates were selected from the microcosm experiments for further growth testing in microplate experiments with various enrichment media and MC-LR over 96 hours (table 2). Biofilm formation potential for the isolates were also measured and data is shown in table 3. Isolate absorbances of ten potential microcystin degraders were incubated in a microplate with MC-LR as the sole carbon source (table 4) and concentrations of MC-LR in microplate wells were measured over time (table 5).
Microcosm experiment data of microcystin-degrading bacteria in Lake Erie source waters and drinking-water plants, 2015-18
공공데이터포털
In 2015-2018, the U.S. Geological Survey (USGS) in cooperation with the U.S. Environmental Protection Agency Great Lakes Restoration Initiative investigated the biodegradation of microcystins in source waters and sand filters from drinking-water plants in the Western Lake Erie Basin. Four source waters and three sand filtrate samples were collected from the intakes and sand filters of Lake Erie drinking-water plants and transported to the USGS Ohio Water Microbiology Laboratory, where investigators set up microcosms to enrich for and identify indigenous bacteria capable of degrading microcystins. Quality control samples were set up in the microcosms to check analyses and included positive controls, negative controls, and replicates. Microcystin biodegradation was quantified by the disappearance of the toxin as compared to control cultures in microcosm and microplate experiments, and by the presence of a gene within microcystin-degrading bacteria that encodes for an enzyme involved in the initial steps of biodegradation. Bacteria were isolated from microcosms enriched with microcystin-LR (MC-LR) and MC-LR concentrations were measured over time by ELISA (table 1). Isolates were selected from the microcosm experiments for further growth testing in microplate experiments with various enrichment media and MC-LR over 96 hours (table 2). Biofilm formation potential for the isolates were also measured and data is shown in table 3. Isolate absorbances of ten potential microcystin degraders were incubated in a microplate with MC-LR as the sole carbon source (table 4) and concentrations of MC-LR in microplate wells were measured over time (table 5).
Environmental factors influencing the quantitative distribution of microcystin and common potentially toxigenic cyanobacteria in US lakes and reservoirs
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Data from NLA 2012 was used to assess biovolume results for cyanobacteria (phytoplankton) in relation to both landscape and in lake factors. Citation information for this dataset can be found in the EDG's Metadata Reference Information section and Data.gov's References section.
Environmental factors influencing the quantitative distribution of microcystin and common potentially toxigenic cyanobacteria in US lakes and reservoirs
공공데이터포털
Data from NLA 2012 was used to assess biovolume results for cyanobacteria (phytoplankton) in relation to both landscape and in lake factors. Citation information for this dataset can be found in the EDG's Metadata Reference Information section and Data.gov's References section.
Data and model archive for multiple linear regression models for prediction of weighted cyanotoxin mixture concentrations and microcystin concentrations at three recurring bloom sites in Kabetogama Lake in Minnesota
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Multiple linear regression models were developed using data collected in 2016 and 2017 from three recurring bloom sites in Kabetogama Lake in northern Minnesota. These models were developed to predict concentrations of cyanotoxins (anatoxin-a, microcystin, and saxitoxin) that occur within the blooms. Virtual Beach software (version 3.0.6) was used to develop four models: two cyanotoxin mixture (MIX) models and two microcystin (MC) models. Models include those using readily available environmental variables (for example, wind speed and specific conductance) and those using additional comprehensive variables (based on laboratory analyses). Many of the independent variables were averages over a certain time period prior to a sample date, whereas other independent variables were lagged between 4 and 8 days. Funding for this work was provided by the U.S Geological Survey – National Park Service Partnership and the U.S. Geological Survey Environmental Health Program (Toxic Substance Hydrology and Contaminant Biology). The resulting model equations and final datasets are included in this data release while an associated child item model archive includes all the files needed to run and develop these VB models.
Data and model archive for multiple linear regression models for prediction of weighted cyanotoxin mixture concentrations and microcystin concentrations at three recurring bloom sites in Kabetogama Lake in Minnesota
공공데이터포털
Multiple linear regression models were developed using data collected in 2016 and 2017 from three recurring bloom sites in Kabetogama Lake in northern Minnesota. These models were developed to predict concentrations of cyanotoxins (anatoxin-a, microcystin, and saxitoxin) that occur within the blooms. Virtual Beach software (version 3.0.6) was used to develop four models: two cyanotoxin mixture (MIX) models and two microcystin (MC) models. Models include those using readily available environmental variables (for example, wind speed and specific conductance) and those using additional comprehensive variables (based on laboratory analyses). Many of the independent variables were averages over a certain time period prior to a sample date, whereas other independent variables were lagged between 4 and 8 days. Funding for this work was provided by the U.S Geological Survey – National Park Service Partnership and the U.S. Geological Survey Environmental Health Program (Toxic Substance Hydrology and Contaminant Biology). The resulting model equations and final datasets are included in this data release while an associated child item model archive includes all the files needed to run and develop these VB models.
Data for multiple linear regression models for predicting microcystin concentration action-level exceedances in selected lakes in Ohio
공공데이터포털
Site-specific multiple linear regression models were developed for eight sites in Ohio—six in the Western Lake Erie Basin and two in northeast Ohio on inland reservoirs--to quickly predict action-level exceedances for a cyanotoxin, microcystin, in recreational and drinking waters used by the public. Real-time models include easily- or continuously-measured factors that do not require that a sample be collected. Real-time models are presented in two categories: (1) six models with continuous monitor data, and (2) three models with on-site measurements. Real-time models commonly included variables such as phycocyanin, pH, specific conductance, and streamflow or gage height. Many of the real-time factors were averages over time periods antecedent to the time the microcystin sample was collected, including water-quality data compiled from continuous monitors. Comprehensive models use a combination of discrete sample-based measurements and real-time factors. Comprehensive models were useful at some sites with lagged variables (< 2 weeks) for cyanobacterial toxin genes, dissolved nutrients, and (or) N to P ratios. Comprehensive models are presented in three categories: (1) three models with continuous monitor data and lagged comprehensive variables, (2) five models with no continuous monitor data and lagged comprehensive variables, and (3) one model with continuous monitor data and same-day comprehensive variables. Funding for this work was provided by the Ohio Water Development Authority and the U.S. Geological Survey Cooperative Water Program.
Data for multiple linear regression models for predicting microcystin concentration action-level exceedances in selected lakes in Ohio
공공데이터포털
Site-specific multiple linear regression models were developed for eight sites in Ohio—six in the Western Lake Erie Basin and two in northeast Ohio on inland reservoirs--to quickly predict action-level exceedances for a cyanotoxin, microcystin, in recreational and drinking waters used by the public. Real-time models include easily- or continuously-measured factors that do not require that a sample be collected. Real-time models are presented in two categories: (1) six models with continuous monitor data, and (2) three models with on-site measurements. Real-time models commonly included variables such as phycocyanin, pH, specific conductance, and streamflow or gage height. Many of the real-time factors were averages over time periods antecedent to the time the microcystin sample was collected, including water-quality data compiled from continuous monitors. Comprehensive models use a combination of discrete sample-based measurements and real-time factors. Comprehensive models were useful at some sites with lagged variables (< 2 weeks) for cyanobacterial toxin genes, dissolved nutrients, and (or) N to P ratios. Comprehensive models are presented in three categories: (1) three models with continuous monitor data and lagged comprehensive variables, (2) five models with no continuous monitor data and lagged comprehensive variables, and (3) one model with continuous monitor data and same-day comprehensive variables. Funding for this work was provided by the Ohio Water Development Authority and the U.S. Geological Survey Cooperative Water Program.
Liquid Chromatography Triple Quadrupole Mass Spectrometry (LC/MS/MS) analysis of cyanobacteria cultures from Lake Elsinore and Canyon Lake (CA, USA, 2016) for cyanotoxins and algal toxins
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Cyanobacteria are common in inland water bodies. Many strains are known to produce potent toxins (cyanotoxins) which can impact human and animal health in sufficient concentrations. Lake Elsinore and Canyon Lake are two impaired lakes in California with frequent cyanobacteria blooms that are not monitored for toxin production. These data document the liquid chromatography triple quadrupole mass spectrometry (LC/MS/MS) results for 21 cyanotoxins and algal toxins in 13 cyanobacteria samples collected during bloom events from Lake Elsinore and Canyon Lake (CA, USA) in July, August, and September 2016.