These data were collected by the NOAA Southeast Fisheries Science Center to document the presence or absence of Acropora spp at shallow reef sites in the Upper Florida Keys (USA). The presence or absence of acroporid corals was marked by handheld GPS during snorkel or tow surveys of shallow water (<5m) reef habitats in the Upper Florida Keys National Marine Sanctuary. The data are in GIS shape and layer files with associated attribute files, metadata files, and additional .pdf file outputs of the GIS data layers.

This dataset is an inventory of seafloor mapping data from hydrographic multibeam sonar surveys and georeferenced benthic photographs and video clips, all collected in and around the Florida Keys National Marine Sanctuary (FKNMS). The multibeam data sets contain both bathymetric and backscatter data for the FKNMS and adjacent areas in the Atlantic Ocean, bounded to the North by the Florida Keys, and contain detailed surveys of various portions of FKNMS such as the Dry Tortugas and Tortugas Bank areas. Underwater video and photographs for ground validation were acquired during research cruises in the FKNMS. All of these datasets can be visualized online in the 2nd edition of the FKNMS Digital Atlas.

This data set contains data from visual surveys by snorkelers using handheld GPS units to map extant live colonies of the threatened corals Acropora palmata and A. cervicornis in the upper Florida Keys. Appropriate habitat strata were targeted and prioritized from habitat maps in 2005. An initial survey was conducted in 2005-2007 of these reef areas. Follow-up surveys are being conducted in 2013-2015 to assess potential substantial changes in distribution and/or abundance in the same reef areas.

Coral reefs serve as natural barriers that protect adjacent shorelines from coastal hazards such as storms, waves and erosion but projections indicate global degradation of coral reefs due to anthropogenic impacts and climate change will cause a transition to net erosion by mid-century. The U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center conducted research to quantify the combined effect of all constructive and destructive processes on modern coral reef ecosystems by measuring regional-scale changes in seafloor elevation. USGS staff assessed five coral reef ecosystems in the Atlantic Ocean (Upper and Lower Florida Keys), Caribbean Sea (U.S. Virgin Islands: St. Thomas and Buck Island, St. Croix), and Pacific Ocean (Maui, Hawaii), including both coral-dominated and adjacent, non-coral dominated habitats. Scientists used historical bathymetric data from the 1930s to 1980s and contemporary light detection and ranging (lidar) digital elevation models (DEMs) from the late 1990s to 2000s to calculate changes in seafloor elevation for each study site over time periods reflecting low to high anthropogenic impacts. LFK_ElevationChange.zip contains the location, elevation, and elevation change data for the Lower Florida Keys. Using these changes in elevation, further analysis was done to calculate corresponding changes in seafloor volume for all study areas and habitat types within each site.

Coral reefs serve as natural barriers that protect adjacent shorelines from coastal hazards such as storms, waves and erosion but projections indicate global degradation of coral reefs due to anthropogenic impacts and climate change will cause a transition to net erosion by mid-century. The U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center conducted research to quantify the combined effect of all constructive and destructive processes on modern coral reef ecosystems by measuring regional-scale changes in seafloor elevation. USGS staff assessed five coral reef ecosystems in the Atlantic Ocean (Upper and Lower Florida Keys), Caribbean Sea (U.S. Virgin Islands: St. Thomas and Buck Island, St. Croix), and Pacific Ocean (Maui, Hawaii), including both coral-dominated and adjacent, non-coral dominated habitats. Scientists used historical bathymetric data from the 1930s to 1980s and contemporary light detection and ranging (lidar) digital elevation models (DEMs) from the late 1990s to 2000s to calculate changes in seafloor elevation for each study site over time periods reflecting low to high anthropogenic impacts. LFK_ElevationChange.zip contains the location, elevation, and elevation change data for the Lower Florida Keys. Using these changes in elevation, further analysis was done to calculate corresponding changes in seafloor volume for all study areas and habitat types within each site.

This data set consists of an ArcView shapefile set that contains locations of sampled coral reef fish species at the National Marine Sanctuary along the Florida Keys. The dataset contains information about 5 classes of coral reefs, 216 fish species, and 6 benthic habitat.

The U.S. Geological Survey St. Petersburg Coastal and Marine Science Center’s (USGS SPCMSC) Core Archive in St. Petersburg, FL contains a collection of coral-reef cores collected from throughout the Florida Keys reef tract (FKRT). In a previous study (Toth and Stathakopoulos, 2019), USGS researchers analyzed the upper, Holocene (~11,700 years ago to present) sections of those cores to evaluate how the coral composition of the FKRT changed over millennial timescales. Using the same methods, USGS researchers quantified the relative composition of late Pleistocene (~116 to 74 thousand years before present; Marine Isotope Stages [MIS] 5d, 5c, 5b, and 5a) sections of the coral reef cores dated by Hsia and others (2024a,b). This data release provides metadata about the location of the cores and summarizes the relative composition of coral taxa and other carbonates and the water depths (relative to modern mean sea level) of the analyzed core intervals. The data release also provides a summary of previously unpublished data (collected by David Weinstein) on the relative composition of an older Late Pleistocene reef (growing ~130–116 thousand years before present; MIS5e) from the subaerially exposed fossil reef at Windley Key Fossil Reef Geological Park. These data are compared with Holocene and modern coral-reef assemblages on the FKRT in Toth and others (2025).

Coral reefs serve as natural barriers that protect adjacent shorelines from coastal hazards such as storms, waves and erosion but projections indicate global degradation of coral reefs due to anthropogenic impacts and climate change will cause a transition to net erosion by mid-century. The U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center conducted research to quantify the combined effect of all constructive and destructive processes on modern coral reef ecosystems by measuring regional-scale changes in seafloor elevation. USGS staff assessed five coral reef ecosystems in the Atlantic Ocean (Upper and Lower Florida Keys), Caribbean Sea (U.S. Virgin Islands: St. Thomas and Buck Island, St. Croix), and Pacific Ocean (Maui, Hawaii), including both coral-dominated and adjacent, non-coral dominated habitats. Scientists used historical bathymetric data from the 1930s to 1980s and contemporary light detection and ranging (lidar) digital elevation models (DEMs) from the late 1990s to 2000s to calculate changes in seafloor elevation for each study site over time periods reflecting low to high anthropogenic impacts. UFK_ElevationChange.zip contains the location, elevation, and elevation change data for the Upper Florida Keys. Using these changes in elevation, further analysis was done to calculate corresponding changes in seafloor volume for all study areas and habitat types within each site.

Binary point-cloud data were produced for a portion of the upper Florida Keys reef tract, Florida, from remotely sensed, geographically referenced elevation measurements collected by Leading Edge Geomatics (LEG) using a Leica Chiroptera II Bathymetric and Topographic Sensor. Dewberry reports that the nominal pulse spacing for this project was 1 point every 0.7 meters. Dewberry used proprietary procedures to classify the LAS according to project specifications: 0-Never Classified, 1-Unclassified, 2-Ground (includes model key point bit for points identified as Model Key Point), 7-Low Noise, 17-Bridges, 18-High Noise, 40-Bathymetric point or submerged topography (includes model key point bit for points identified as Model Key Point), 41-Water Surface, and 42-Derived water surface.