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A national harmonized dataset of discrete chlorophyll from lakes and streams (2005-2022)
<p>This data release contains a 17-year record (2005-2022) of discrete chlorophyll data from inland waters, collected from across the nation and territories. These data are from discrete samples (collected in the field and analyzed in the laboratory) from plankton (suspended algae) and periphyton (benthic algae) from lakes, streams, rivers, reservoirs, canals, and other sites. These data are gathered to support process and remote sensing modeling and prediction of Harmful Algal Blooms (HABs). The chlorophyll data were compiled from the Water Quality Portal (WQP) and USGS National Water Quality Lab (NWQL). <br/> <br/> Data for uncorrected chlorophyll a, corrected chlorophyll a, and pheophytin from EPA Methods 445 and 446 are included and reported, following the conventions of EPA section 445:</p> <ul> <li><b>12.1 uncorrected chlorophyll a</b> – based on the initial optical measurement of the sample, which includes both chlorophyll a and pheophytin</li> <li><b>12.2 corrected chlorophyll a</b> – based on optical measurement after acidification and calculation to estimate the amount of active chlorophyll in the original sample</li> <li><b>12.3 pheophytin</b> – based on calculations to estimate the amount of pheophytin in the original sample</li> </ul> <p>These data were harmonized for reporting units (plankton as µg/L and periphyton as mg/m2), duplicate values, collection depth, site type, negative values, and some extreme values. HABs events are associated with high values of chlorophyll, as algae may be concentrated in dense surface scums. These data may include an indicator for hydrologic event code, which may be helpful in determining HABs events. <br/><br/></p> <h4>Acknowledgements</h4> <p> This work was completed as part of two projects in the USGS Water Mission Area (WMA) Water Quality Processes Program: (1) the Improved Understanding and Prediction of Prioritized Constituents Project, an effort to advance datasets and understanding of chlorophyll, nutrient, carbon, and sediment occurrence and transport, and (2) the Proxies Project, an effort to develop estimation methods for PFAS, harmful algal blooms, and metals, at multiple spatial and temporal scales. <br/> <br/> Arar, E.J. and Collins, G.B. 1997. Method 445.0: In vitro determination of chlorophyll a and pheophytin a in marine and freshwater algae by fluorescence. EPA Office of Research and Development.</p>
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A national harmonized dataset of discrete chlorophyll from lakes and streams (2005-2022)
공공데이터포털

This data release contains a 17-year record (2005-2022) of discrete chlorophyll data from inland waters, collected from across the nation and territories. These data are from discrete samples (collected in the field and analyzed in the laboratory) from plankton (suspended algae) and periphyton (benthic algae) from lakes, streams, rivers, reservoirs, canals, and other sites. These data are gathered to support process and remote sensing modeling and prediction of Harmful Algal Blooms (HABs). The chlorophyll data were compiled from the Water Quality Portal (WQP) and USGS National Water Quality Lab (NWQL).

Data for uncorrected chlorophyll a, corrected chlorophyll a, and pheophytin from EPA Methods 445 and 446 are included and reported, following the conventions of EPA section 445:

  • 12.1 uncorrected chlorophyll a – based on the initial optical measurement of the sample, which includes both chlorophyll a and pheophytin
  • 12.2 corrected chlorophyll a – based on optical measurement after acidification and calculation to estimate the amount of active chlorophyll in the original sample
  • 12.3 pheophytin – based on calculations to estimate the amount of pheophytin in the original sample

These data were harmonized for reporting units (plankton as µg/L and periphyton as mg/m2), duplicate values, collection depth, site type, negative values, and some extreme values. HABs events are associated with high values of chlorophyll, as algae may be concentrated in dense surface scums. These data may include an indicator for hydrologic event code, which may be helpful in determining HABs events.

Acknowledgements

This work was completed as part of two projects in the USGS Water Mission Area (WMA) Water Quality Processes Program: (1) the Improved Understanding and Prediction of Prioritized Constituents Project, an effort to advance datasets and understanding of chlorophyll, nutrient, carbon, and sediment occurrence and transport, and (2) the Proxies Project, an effort to develop estimation methods for PFAS, harmful algal blooms, and metals, at multiple spatial and temporal scales.

Arar, E.J. and Collins, G.B. 1997. Method 445.0: In vitro determination of chlorophyll a and pheophytin a in marine and freshwater algae by fluorescence. EPA Office of Research and Development.

Multi-source Discrete Chlorophyll Data in the Illinois River Basin, 1981–2023
공공데이터포털
This data release contains discrete chlorophyll data, specifically corrected chlorophyll a, uncorrected chlorophyll a, and pheophytin pigments, from inland waters in the Illinois River Basin for 1981–2023. These data are discrete samples (collected in the field and analyzed in the laboratory) of plankton (suspended algae) and periphyton (benthic algae) from lakes, streams, rivers, canals, and other aquatic sites. These data support the investigation of harmful algal blooms (HABs) in the Illinois River Basin. The data are multi-source, meaning multiple monitoring organizations collected and analyzed these samples. Data were sourced from the Water Quality Portal (WQP; which contains water quality data from many organizations), Illinois Natural History Survey (INHS), the Fox River Study Group (FRSG; which also contains data from multiple organizations), and previously unpublished data from the US Geological Survey’s National Water Quality Laboratory. Final chlorophyll data are provided in the "all_combined_chl_data.csv" file. Data provided by the INHS included non-chlorophyll water quality data that are published in the "all_other_inhs_data.csv" file. Site information is provided in the "site_list_final.csv" file. The "site_list_original.csv" file provides information for collocated sites that had multiple identifiers (i.e., different site numbers provided by different organizations though samples were all collected at the same physical location). These collocated sites were assigned a single identifier which is used in "site_list_final.csv." Additional details are found in the process steps.
Multi-source Discrete Chlorophyll Data in the Illinois River Basin, 1981–2023
공공데이터포털
This data release contains discrete chlorophyll data, specifically corrected chlorophyll a, uncorrected chlorophyll a, and pheophytin pigments, from inland waters in the Illinois River Basin for 1981–2023. These data are discrete samples (collected in the field and analyzed in the laboratory) of plankton (suspended algae) and periphyton (benthic algae) from lakes, streams, rivers, canals, and other aquatic sites. These data support the investigation of harmful algal blooms (HABs) in the Illinois River Basin. The data are multi-source, meaning multiple monitoring organizations collected and analyzed these samples. Data were sourced from the Water Quality Portal (WQP; which contains water quality data from many organizations), Illinois Natural History Survey (INHS), the Fox River Study Group (FRSG; which also contains data from multiple organizations), and previously unpublished data from the US Geological Survey’s National Water Quality Laboratory. Final chlorophyll data are provided in the "all_combined_chl_data.csv" file. Data provided by the INHS included non-chlorophyll water quality data that are published in the "all_other_inhs_data.csv" file. Site information is provided in the "site_list_final.csv" file. The "site_list_original.csv" file provides information for collocated sites that had multiple identifiers (i.e., different site numbers provided by different organizations though samples were all collected at the same physical location). These collocated sites were assigned a single identifier which is used in "site_list_final.csv." Additional details are found in the process steps.
Lake chlorophyll-a upstream nutrients CONUS
공공데이터포털
Publicly available data used to generate manuscript figures. This dataset is associated with the following publication: Dietrich, M., H. Golden, J. Christensen, C. Lane, and M. Dumelle. Lake Chlorophyll-a Linked to Upstream Nutrients across the Conterminous United States. Environmental Science & Technology Letters. American Chemical Society, Washington, DC, USA, 1406–1412, (2024).
River-Chla-qPCR dataset
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This dataset is the evaluation of eutrophication in rivers based on quantitative polymerase chain reactions (qPCRs) of phytoplankton. The qPCR data of 2017, 2018, and 2019 are included in the current dataset. The 2917, 2018, and 2019 physicochemical and biological data generated by the USGS are also included in the current file. This dataset is associated with the following publication: Zhang, C., K. McIntosh, N. Sienkiewicz, E.A. Stelzer, J.L. Graham, and J. Lu. qPCR-based phytoplankton abundance and chlorophyll a: A multi-year study in twelve large freshwater rivers across the United States. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 954: 175067, (2024).