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Genetic Data Associated with Avian Keratin Disorder and Poecivirus in Black-capped Chickadees, Alaska, 2001-2017
This dataset contains results of genetic screening for Poecivirus from samples of black-capped chickadees (BCCH; Poecile atricapillus) with and without clinical signs of avian keratin disorder (AKD). Data include information on detection/non-detection of the virus in tissue collected with buccal swabs, cloacal swabs, blood samples, and fecal samples from up to 124 individuals between 2015 and 2017 from various locations in southcentral Alaska. For an additional 17 symptomatic (and one asymptomatic) individual(s) collected between 2001 and 2015 in the same region, data include measurements of viral load in beak tissue measured by qRT-PCR as well as the amount of actively replicating virus detected by 7 negative-strand and 2 positive-strand oligonucleotide probes, all relative to amounts of host RNA. Ancillary data on beak measurements, clinical signs of AKD (beak overgrowth or hyperkeratosis at the cellular level), locations, and dates of collection are also included for each individual.
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Data Associated with Poecivirus Testing of Individual Birds with Beak Deformities
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This data set is comprised of two tables, one with results of poecivirus screening of tissues from six North American avian species using PCR followed by Sanger sequencing in addition to unbiased metagenomic sequencing, the second lists the names and sequences of primers used.
Morphology and Disease Information from Waterfowl, Interior Alaska, 2010
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This data set includes data from five waterfowl species (northern pintail, American wigeon, lesser scaup, green-winged teal and mallard) that were captured in Interior Alaska in 2010, then measured and sampled for blood parasites and avian influenza infections.
Peregrine Falcon (Falco peregrinus) mtDNA and Microsatellite Genetic Data, Alaska, Canada and Russia, 1880-2012
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This data set provides sample information, microsatellite genotype, and NCBI accession numbers for mitochondrial DNA sequences of peregrine falcons (Falco peregrinus) from North America and Russia.
Peregrine Falcon (Falco peregrinus) mtDNA and Microsatellite Genetic Data, Alaska, Canada and Russia, 1880-2012
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This data set provides sample information, microsatellite genotype, and NCBI accession numbers for mitochondrial DNA sequences of peregrine falcons (Falco peregrinus) from North America and Russia.
Genetic Data From Nesting Steller's Eiders (Polysticta stelleri), Near Utqiagvik, Alaska, 1995-2016
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This data set is comprised of one table with Steller's Eider sample information and allele sizes for 6 microsatellite loci (Sfiµ3, Sfiµ4, Sfiµ10, Sfiµ11, Bcaµ11, Smo10).
Blood Parasite Infection Data from Northwestern Crows (Corvus caurinus), Alaska, 2007-2008
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This data set consists of two tables associated with a study of Haemosporidian parasite infection in Northwestern Crows (Corvus caurinus) sampled at six locations throughout southcentral and southeast Alaska in 2007-2008. The first table contains species, location, banding, and morphometric data for all samples. The second table contains results from heamosporidian parasite screening of crow blood samples using molecular techniques. Genomic DNA was extracted from blood samples and screened for the presence of Haemoproteus, Plasmodium, and Leucocytozoon blood parasites using a nested-PCR method. Parasite genetic data is provided as GenBank accession numbers for any samples that tested positive for haemosporidian infection
Blood Parasite Infection Data from Northwestern Crows (Corvus caurinus), Alaska, 2007-2008
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This data set consists of two tables associated with a study of Haemosporidian parasite infection in Northwestern Crows (Corvus caurinus) sampled at six locations throughout southcentral and southeast Alaska in 2007-2008. The first table contains species, location, banding, and morphometric data for all samples. The second table contains results from heamosporidian parasite screening of crow blood samples using molecular techniques. Genomic DNA was extracted from blood samples and screened for the presence of Haemoproteus, Plasmodium, and Leucocytozoon blood parasites using a nested-PCR method. Parasite genetic data is provided as GenBank accession numbers for any samples that tested positive for haemosporidian infection
Genetic Data from Three Accipiter Species, North America, 1996-2014
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This data set provides sample collection information and genetic data used to identify relationships between groups of North American accipiters, including one hybrid. Genetic data includes gender identification, nuclear and mtDNA sequence markers, and microsatellite genotypes derived from 20 autosomal loci (Age1302, Age1303, Age1304, Age1305, Age1306, Age1307, Age1308, Age1309, Age1310, Age1311, Age1312, Age1313, Age1314, Age1316, Age1317, Age1318, Age1319, Age1320, Age1321, and Age1322).
Genetic Data from Three Accipiter Species, North America, 1996-2014
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This data set provides sample collection information and genetic data used to identify relationships between groups of North American accipiters, including one hybrid. Genetic data includes gender identification, nuclear and mtDNA sequence markers, and microsatellite genotypes derived from 20 autosomal loci (Age1302, Age1303, Age1304, Age1305, Age1306, Age1307, Age1308, Age1309, Age1310, Age1311, Age1312, Age1313, Age1314, Age1316, Age1317, Age1318, Age1319, Age1320, Age1321, and Age1322).
Genomic Data of North American Sea Ducks
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This data set describes accession numbers for nucleotide sequence data derived from whole mitochondrial genome and double digest restriction-site associated DNA (ddRAD).
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