Acropora cervicornis, A. palmata and Orbicella faveolata are important reef-building coral species in the Florida Reef Tract (FRT). These species have experienced alarming declines throughout the FRT, resulting in an increased risk of inbreeding depression and susceptibility to decreased fitness in surviving colonies. Acropora cervicornis, A. palmata and O. faveolata are broadcast spawners, introducing genetic diversity through sexual recombination of gametes during annual spawning events. Successful reproduction during this time is critical for curbing the deleterious effects of inbreeding depression, and in successfully restoring wild colonies to self-sustaining levels of genetic diversity. A critical step in the reproductive cycle of these species is the success of gamete fertilization following mass spawning events. Several abiotic causes of gametic incompatibilities have been reliably observed in these species, and incompatibility between certain genotypes has been shown to occur. This dataset represents the collection of gametes from three coral species following nine spawning events in the Florida Keys during two spawning years (2019 and 2022), reciprocal fertilization trials with gametes from each parent and determined fertilization success for each cross. Additionally, tissue fragments were collected from each A. cervicornis parent, DNA was isolated from the tissue and single nucleotide polymorphism analyses were performed using the Axiom Coral-Algae Genotyping array (Axiom AcropSNP, ThermoFisher Scientific). This data package contains images of coral eggs post fertilization trial and the results in spreadsheet format. The raw A. cervicornis single nucleotide polymorphism (SNP) data are also provided.

Six replicate fragments from each of twelve A. cervicornis genotypes from the University of Miami (UM) and twelve genotypes from the Nova Southeastern University (NSU) nurseries were collected and brought to the Experimental Reef Lab (ERL). At ERL, the growth rates of all the fragments were assessed using buoyant weight. For the UM genotypes, the maximum photosynthetic yield of the algal symbionts (Fv/Fm) was additionally measured.

Staghorn coral, Acropora cervicornis, is a threatened species and the primary focus of western Atlantic reef-restoration efforts to date. As part of the USGS Coral Reef Ecosystems Studies project (http://coastal.er.usgs.gov/crest/), scientists investigated skeletal characteristics of nursery-grown staghorn coral reared using two commonly used grow-out methods at Mote Tropical Research Laboratory’s offshore nursery. USGS staff compared linear extension, calcification rate, and skeletal density of nursery-raised A. cervicornis branches reared for six months either on blocks attached to substratum or hanging from monofilament line (on PVC “trees”) in the water column. The results demonstrated that branches grown on the substratum had significantly higher skeletal density, measured using computerized tomography (CT), and lower linear extension rates compared to water-column fragments. Calcification rates determined with buoyant weighing were not statistically different between the two grow-out methods, but did vary among coral genotypes. Whereas skeletal density and extension rates were plastic traits that depended on environment, the calcification rate was conserved. Results show that the two rearing methods generate the same amount of calcium-carbonate skeleton but produce colonies with different skeletal characteristics, and suggest that genetically based variability in coral-calcification performance exists. The data resulting from this experiment are provided in this data release and are interpreted in Kuffner et al. (2017).

Staghorn coral, Acropora cervicornis, is a threatened species and the primary focus of western Atlantic reef-restoration efforts to date. As part of the USGS Coral Reef Ecosystems Studies project (http://coastal.er.usgs.gov/crest/), scientists investigated skeletal characteristics of nursery-grown staghorn coral reared using two commonly used grow-out methods at Mote Tropical Research Laboratory’s offshore nursery. USGS staff compared linear extension, calcification rate, and skeletal density of nursery-raised A. cervicornis branches reared for six months either on blocks attached to substratum or hanging from monofilament line (on PVC “trees”) in the water column. The results demonstrated that branches grown on the substratum had significantly higher skeletal density, measured using computerized tomography (CT), and lower linear extension rates compared to water-column fragments. Calcification rates determined with buoyant weighing were not statistically different between the two grow-out methods, but did vary among coral genotypes. Whereas skeletal density and extension rates were plastic traits that depended on environment, the calcification rate was conserved. Results show that the two rearing methods generate the same amount of calcium-carbonate skeleton but produce colonies with different skeletal characteristics, and suggest that genetically based variability in coral-calcification performance exists. The data resulting from this experiment are provided in this data release and are interpreted in Kuffner et al. (2017).

This data set examined variation in prey choice of C. abbreviata based on host-origin, prey condition, and potential social interaction using paired choice assay experiments with A. cervicornis prey sourced from a field nursery.

This data set includes experimental results of fertilization assays to characterize genetic compatibility between individual parental genotypes. Targeted species include Acropora palmata and Orbicella faveolata. Microsatellite multi-locus genotypes for the O.faveolata parental population are included.

To investigate the potential nutrient enrichment of corals by fish wastes, Acropora kenti, Pocillopora verrucosa, Poritesa lutea and Platygyra daedalea colonies were collected from the GBR in Feb 2022, then returned to AIMS's National Sea Simulator. Coral were sampled for protein/symbiont density, then fragmented into smaller (~10g) pieces and aloowed to recover and acclimate to the captive conditions for 1.5 months. Corals were then randomally allocated to treatments where they were either 1) kept with a school of 10 juvenile Chromis viridis fed a pelleted diet, 2) supplied filtered water from a tank housing C. viridis, 3) fed live feeds (enriched Artemia/rotifers and microalgae mix) whilst maintained with C. viridis, 4) supplied only with the live feeds, 5) supplied with a pelleted fish diet without C. viridis, and 6) not supplied feeds and without C. viridis, with four replicate tanks per treatment. During the experiment survival of corals was monitored, growth was measured using bouyant weight and photosynthetic efficiency tracked using dark adapated maximum quantum yield (Fv/Fm). At the end of the experiment, a subset of the samples were frozen and tissue stripped using high-pressure air and filtered seawater. The resulting tissue slurry was homogenised, then used to measure protein contect via a BCA assay and symbiont density using a BD Acurri C6 Flow Cytometer. Water quailty samples were taken weekly throughout the experiment, and analysed for NH4, NO2, NO3, PO4, DOC, PN and PC. Fish were anaethatised using Aqui-S at the end of the experiment and weighed.

This dataset is compromised of proteomic results from four species of stony coral (Orbicella faveolata, Orbicella franksi, Montastraea cavernosa, and Colpophyllia natans) collected in Dry Tortugas over the course of a year during the onset of stony coral tissue loss disease (SCTLD) (Sept 2021 - Aug 2022).