The State of Hawaii DLNR (Department of Land and Natural Resources) DAR (Division of Aquatic Resources) marine monitoring team conducted surveys for benthic monitoring at one deep (10 meter) and one shallow (3 meter) site at Laupahoehoe, Hawaii Island. Deep and shallow sites were surveyed through benthic photo quad image collection along 10 fixed transects. These permanent monitoring sites were established as part of the Coral Reef Assessment and Monitoring Program (CRAMP). Sites were paired to represent the shallow and deep habitat at each location. Twenty-five random points were overlaid on each image in CoralNet (coralnet.ucsd.edu) and were annotated by staff members to obtain data for percent cover of benthic taxa.

The benthic cover data described here result from benthic photo-quadrat surveys conducted by the NOAA Coral Reef Ecosystem Program (CREP) in hard bottom shallow water (< 15 m) habitats in Timor-Leste during reef fish surveys surveys at 150 sites that were selected using a stratified random sampling design in June 2013, and along transects at fixed climate survey sites in September-October 2014 (10 sites and 8 sites, respectively). Climate sites were established by CREP to establish ecological baselines for climate change by measuring multiple features of the coral reef environment (in addition to the data described herein) over time. The reef fish surveys were conducted to generate baseline data on the nearshore coral reef fish assemblages and associated benthic communities around Timor-Leste's north coast and Atauro Island. Percent benthic cover for each site is estimated from a photo-transect (30 photographs, taken at 1-m intervals, 10+ points analyzed per photograph using Coral Point Count with Extensions). NA values represent situations where images were either not gathered or not analyzed. These benthic cover data for Timor-Leste provide an estimate of the benthic community composition at each survey site, and give context to the results from the other survey components. The benthic images, and the associated reef fish survey data and parameters measured to establish ecological baselines for climate change are documented separately.

The benthic cover data described here were generated from the quantitative analysis of photoquadrat benthic images using image analysis software, whereby random points are projected on each image and the benthic elements falling directly underneath each point are identified. The images were collected at 18 stratified randomly selected sites in Vatia Bay in 2015 during belt transect surveys of coral demography by the NOAA Coral Reef Ecosystem Program (CREP). The benthic cover data can be accessed online via the NOAA National Centers for Environmental Information (NCEI) Ocean Archive. The benthic images and coral demography data are described and archived separately.

This data package includes benthic imagery, raw benthic cover, mean benthic cover, and mean macroalgae cover data of Nu'uuli Pala Lagoon and Backreef in American Samoa in 2024, produced from the benthic imagery analysis performed by the Ecosystem Sciences Division (ESD) of the Pacific Island Fisheries Science Center (PIFSC) and funded by the Coral Reef Conservation Program (CRCP). Benthic imagery was collected at 20 randomly-selected sites during coral demographic surveys by the NOAA ESD during the 2024 fly-in mission to American Samoa (MP2502). After processing and sorting site photos, imagery was qualitatively analyzed using the web-based CoralNet image annotation tool. CoralNet projects random points on each image, and the benthic elements falling directly underneath each point are identified by trained scientists. Data from benthic surveys of Nu'uuli Pala Lagoon and Backreef establishes a comprehensive biological baseline for land-based sources of pollution impacts on benthic composition and coral demography. These efforts feed into the higher-level CRCP objectives by establishing an in-situ tracking system to assess the effects of management and mitigation strategies and activities in the target watersheds to reduce land-based sources of pollution impacts on coral reefs. This data was funded by CRCP Project #31454 titled "Develop monitoring capacity of American Samoan jurisdictional partners and observing LBSP impacts on coral reefs".