Bed sediment samples were collected from the intertidal, and subtidal shallows of San Pablo Bay National Wildlife Refuge and Corte Madera Bay near stations where instrumented platforms that were collecting hydrographic time-series were deployed. Sediment sediments were collected with push cores, either manually or by subsampling a Gomex box corer. Cores, which ranged in length from 5 to 18 centimeters (cm), were sectioned by depth. The top two sections from each core were 0.5 cm thick, the following sections were 1 cm thick, sections below 6 cm were often sectioned either into sections that were 1 or 2 cm thick. Additional samples were taken from sediment deposited on ceramic tiles attached to the marsh surface. Samples were analyzed for sediment properties including bulk density, particle size distribution, loss on ignition, and percent carbon.

Bed sediment samples were collected from the intertidal, and subtidal shallows of San Pablo Bay National Wildlife Refuge and Corte Madera Bay near stations where instrumented platforms that were collecting hydrographic time-series were deployed. Sediment sediments were collected with push cores, either manually or by subsampling a Gomex box corer. Cores, which ranged in length from 5 to 18 centimeters (cm), were sectioned by depth. The top two sections from each core were 0.5 cm thick, the following sections were 1 cm thick, sections below 6 cm were often sectioned either into sections that were 1 or 2 cm thick. Additional samples were taken from sediment deposited on ceramic tiles attached to the marsh surface. Samples were analyzed for sediment properties including bulk density, particle size distribution, loss on ignition, and percent carbon.

In situ images of the sediment-water interface and sediment profiles were collected to characterize the top layer of the sediment bed (less than 15 cm sediment depth) prior to dredged material placement and post dredge material placement in south San Francisco Bay, California. Several sites within the placement area, as well as sites outside of the placement area, and near time-series stations were collected. The photos were acquired during four separate trips: August 2023 (pre-placement), October 2023 (pre-placement), January 2023 (post-placement), and February (greater than 1 year post-placement). The sediment profile imaging system consisted of a Blackfly S Board-level BFS-GE-50S5C0BD2 camera that incorporates a Sony IMX264 sensor and has an m12-mount type wide-angle 4.4 mm lens. The resulting field of view was approximately 7x15 cm at the window, with a resolution of 0.0667 mm per pixel when the vertically (portrait) oriented window of the housing was pushed into the sediment bed. The camera was secured horizontally in Sediment Profile Imaging (SPI) camera waterproof housing from OceanInstruments, which was lowered to the bay floor at the different stations and pushed from above into the sediment bed using a rigidly attached pole. The images captured using the system show a profile view which includes a surface view of the sediment bed where the window was above the water-sediment interface, and/or a high-resolution sediment profile where the window extended vertically down into the sediment bed and was flush with the sediment. The maximum depth below the water-sediment interface recorded by the sediment profile imaging camera was approximately 15 cm.

To better understand sediment deposition in marsh environments, scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center (USGS-SPCMSC) selected five marsh study sites (Sites 5, 6, 7, 8, and 9) and four nearshore estuarine study sites (Sites 8S, 8D, 9S, 9D) along the Point Aux Chenes Bay shoreline of the Grand Bay National Estuarine Research Reserve (GNDNERR), Mississippi. This study builds on Smith and others (2020b) and includes datasets collected after the installation of a living shoreline (a subtidal sill [artificial reef]) that was completed in May 2021. Each marsh site consisted of five plots located along a transect perpendicular to the marsh-estuary shoreline at 5-meter (m) increments (5, 10, 15, 20, and 25 m from the shoreline). Each plot contained three to six net sedimentation tiles (NST) that were secured flush to the marsh surface using polyvinyl chloride (PVC) pipe. NST are an inexpensive and simple tool to assess short- and long-term deposition that can be deployed in highly dynamic environments without the compaction associated with traditional coring methods. The NST were deployed for three-month sampling periods, measuring sediment deposition from August 2021 to January 2023. Sediment deposited on the NST were processed to determine physical characteristics, such as deposition thickness, volume, wet weight/dry weight, grain size, and organic content (via loss-on-ignition [LOI]). For select sampling periods, ancillary data (water level, elevation, and vegetation) are also provided in this data release. The estuarine sites consisted of Site 8S (shallow; landward of the subtidal sill), 8D (deep; seaward side of the subtidal sill), as well as 9S and 9D (both sites established adjacent to 8S/8D and the subtidal sill). During select trips water parameters (e.g., waves, water level, and turbidity) were collected at each estuarine site to collect turbidity and wave data. Data presented in this data release were collected under three USGS Field Activities Numbers (FAN; one FAN per year) during thirteen sampling trips (alternate FAN; each sampling trip was assigned a unique alt FAN under the main FAN): 2021-320-FA (21CCT01, 21CCT03, 21CCT04, 21CCT05), 2022-302-FA (22CCT01, 22CCT02, 22CCT03, 22CCT04, 22CCT05, 22CCT06, 22CCT07, 22CCT08) and 2023-301-FA (23CCT01), however, every trip does not contain all data types. This data release also contains data for 2020-323-FA (20CCT02) that was collected as a special collection trip for Hurricane Delta. This data was collected before the subtidal sill was installed and is being published with this data release since pre-subtidal sill data was already published. Additional survey and data details are available from the U.S. Geological Survey Coastal and Marine Geoscience Data System (CMGDS) at, https://cmgds.marine.usgs.gov/. Users can look up USGS FANs in the CMGDS by replacing the FAN in the following url: https://cmgds.marine.usgs.gov/services/activity.php?fan=2022-302-FA. Data from a related NST study in the GNDNERR (Middle Bay and North Rigolets) can be found in Smith and others (2020a). Data collected from before the living shoreline (subtidal sill) installation can be found in Smith and others (2020b). For additional information on data processing and analysis, refer to the accompanying journal publication Smith and others (2025). Please read the full metadata for details on data collection, dataset variables, and data quality.

To better understand sediment deposition in marsh environments, scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center (USGS-SPCMSC) selected five marsh study sites (Sites 5, 6, 7, 8, and 9) and four nearshore estuarine study sites (Sites 8S, 8D, 9S, 9D) along the Point Aux Chenes Bay shoreline of the Grand Bay National Estuarine Research Reserve (GNDNERR), Mississippi. This study builds on Smith and others (2020b) and includes datasets collected after the installation of a living shoreline (a subtidal sill [artificial reef]) that was completed in May 2021. Each marsh site consisted of five plots located along a transect perpendicular to the marsh-estuary shoreline at 5-meter (m) increments (5, 10, 15, 20, and 25 m from the shoreline). Each plot contained three to six net sedimentation tiles (NST) that were secured flush to the marsh surface using polyvinyl chloride (PVC) pipe. NST are an inexpensive and simple tool to assess short- and long-term deposition that can be deployed in highly dynamic environments without the compaction associated with traditional coring methods. The NST were deployed for three-month sampling periods, measuring sediment deposition from August 2021 to January 2023. Sediment deposited on the NST were processed to determine physical characteristics, such as deposition thickness, volume, wet weight/dry weight, grain size, and organic content (via loss-on-ignition [LOI]). For select sampling periods, ancillary data (water level, elevation, and vegetation) are also provided in this data release. The estuarine sites consisted of Site 8S (shallow; landward of the subtidal sill), 8D (deep; seaward side of the subtidal sill), as well as 9S and 9D (both sites established adjacent to 8S/8D and the subtidal sill). During select trips water parameters (e.g., waves, water level, and turbidity) were collected at each estuarine site to collect turbidity and wave data. Data presented in this data release were collected under three USGS Field Activities Numbers (FAN; one FAN per year) during thirteen sampling trips (alternate FAN; each sampling trip was assigned a unique alt FAN under the main FAN): 2021-320-FA (21CCT01, 21CCT03, 21CCT04, 21CCT05), 2022-302-FA (22CCT01, 22CCT02, 22CCT03, 22CCT04, 22CCT05, 22CCT06, 22CCT07, 22CCT08) and 2023-301-FA (23CCT01), however, every trip does not contain all data types. This data release also contains data for 2020-323-FA (20CCT02) that was collected as a special collection trip for Hurricane Delta. This data was collected before the subtidal sill was installed and is being published with this data release since pre-subtidal sill data was already published. Additional survey and data details are available from the U.S. Geological Survey Coastal and Marine Geoscience Data System (CMGDS) at, https://cmgds.marine.usgs.gov/. Users can look up USGS FANs in the CMGDS by replacing the FAN in the following url: https://cmgds.marine.usgs.gov/services/activity.php?fan=2022-302-FA. Data from a related NST study in the GNDNERR (Middle Bay and North Rigolets) can be found in Smith and others (2020a). Data collected from before the living shoreline (subtidal sill) installation can be found in Smith and others (2020b). For additional information on data processing and analysis, refer to the accompanying journal publication Smith and others (2025). Please read the full metadata for details on data collection, dataset variables, and data quality.

To better understand sediment deposition in marsh environments, scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center (USGS-SPCMSC) selected four study sites (Sites 5, 6, 7, and 8) along the Point Aux Chenes Bay shoreline of the Grand Bay National Estuarine Research Reserve (GNDNERR), Mississippi. These datasets were collected to serve as baseline data prior to the installation of a living shoreline (a subtidal sill). Each site consisted of five plots located along a transect perpendicular to the marsh-estuary shoreline at 5-meter (m) increments (5, 10, 15, 20, and 25 m from the shoreline). Each plot contained six net sedimentation tiles (NST) that were secured flush to the marsh surface using polyvinyl chloride (PVC) pipe. NST are an inexpensive and simple tool to assess short- and long-term deposition that can be deployed in highly dynamic environments without the compaction associated with traditional coring methods. The NST were deployed for three month sampling periods, measuring sediment deposition from July 2018 to January 2020, with one set of NST being deployed for six months. Sediment deposited on the NST were processed to determine physical characteristics, such as deposition thickness, volume, wet weight/dry weight, grain size, and organic content (loss-on-ignition [LOI]). For select sampling periods, ancillary data (water level, elevation, and wave data) are also provided in this data release. Data were collected during USGS Field Activities Numbers (FAN) 2018-332-FA (18CCT01), 2018-358-FA (18CCT10), 2019-303-FA (19CCT01, 19CCT02, 19CCT03, and 19CCT04, respectively), and 2020-301-FA (20CCT01). Additional survey and data details are available from the U.S. Geological Survey Coastal and Marine Geoscience Data System (CMGDS) at, https://cmgds.marine.usgs.gov/. Data from a related NST study in the GNDNERR (Middle Bay and North Rigolets) can be found in Smith and others (2020). Data collected after the living shoreline (subtidal sill) installation can be found in Terrano and others (2025). For additional information on data processing and analysis, refer to the accompanying journal publication Smith and others (2025). Please read the full metadata for details on data collection, dataset variables, and data quality.

To better understand sediment deposition in marsh environments, scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center (USGS-SPCMSC) selected four study sites (Sites 5, 6, 7, and 8) along the Point Aux Chenes Bay shoreline of the Grand Bay National Estuarine Research Reserve (GNDNERR), Mississippi. These datasets were collected to serve as baseline data prior to the installation of a living shoreline (a subtidal sill). Each site consisted of five plots located along a transect perpendicular to the marsh-estuary shoreline at 5-meter (m) increments (5, 10, 15, 20, and 25 m from the shoreline). Each plot contained six net sedimentation tiles (NST) that were secured flush to the marsh surface using polyvinyl chloride (PVC) pipe. NST are an inexpensive and simple tool to assess short- and long-term deposition that can be deployed in highly dynamic environments without the compaction associated with traditional coring methods. The NST were deployed for three month sampling periods, measuring sediment deposition from July 2018 to January 2020, with one set of NST being deployed for six months. Sediment deposited on the NST were processed to determine physical characteristics, such as deposition thickness, volume, wet weight/dry weight, grain size, and organic content (loss-on-ignition [LOI]). For select sampling periods, ancillary data (water level, elevation, and wave data) are also provided in this data release. Data were collected during USGS Field Activities Numbers (FAN) 2018-332-FA (18CCT01), 2018-358-FA (18CCT10), 2019-303-FA (19CCT01, 19CCT02, 19CCT03, and 19CCT04, respectively), and 2020-301-FA (20CCT01). Additional survey and data details are available from the U.S. Geological Survey Coastal and Marine Geoscience Data System (CMGDS) at, https://cmgds.marine.usgs.gov/. Data from a related NST study in the GNDNERR (Middle Bay and North Rigolets) can be found in Smith and others (2020). Data collected after the living shoreline (subtidal sill) installation can be found in Terrano and others (2025). For additional information on data processing and analysis, refer to the accompanying journal publication Smith and others (2025). Please read the full metadata for details on data collection, dataset variables, and data quality.

Topographic data were collected in the Corte Madera Marsh, San Pablo National Wildlife Refuge Marsh, and at the time-series stations in the shallows adjacent to each marsh in Northern San Francisco Bay between April 2022 and September 2023. The topographic data were acquired using global satellite navigation system receivers that were either mounted on backpacks and hiked over the marsh surface or mounted on a survey rod held shipside against a deployed platform or on the water surface. Sometimes an additional staff was used in conjunction with the shipside survey rod to reach the platform, which we refer to as an integrated collection method.

Topographic data were collected in the Corte Madera Marsh, San Pablo National Wildlife Refuge Marsh, and at the time-series stations in the shallows adjacent to each marsh in Northern San Francisco Bay between April 2022 and September 2023. The topographic data were acquired using global satellite navigation system receivers that were either mounted on backpacks and hiked over the marsh surface or mounted on a survey rod held shipside against a deployed platform or on the water surface. Sometimes an additional staff was used in conjunction with the shipside survey rod to reach the platform, which we refer to as an integrated collection method.

This dataset presents core information such as core IDs, core lengths, depth intervals, and locations from sediment cores collected from Cargill Marsh, South San Francisco Bay, California on June 21, 2022, and December 14, 2023. The cores were collected with hand driven push cores to assess sediment accumulation on the marsh.