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Bailey BW OTUs.xls
OTU tables with taxonomy for zooplankton samples drawn from ballast water tanks, including metadata on sampled vessels. This dataset is associated with the following publication: Bailey, S.A., T. Brydges, O. Casas-Monroy, J. Kydd, R.D. Linley, R.M. Rozon, and J. Darling. First evaluation of ballast water management systems on operational ships for minimizing introductions of nonindigenous zooplankton. MARINE POLLUTION BULLETIN. Elsevier Science Ltd, New York, NY, USA, 182: 113947, (2022).
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Bailey BW OTUs.xls
공공데이터포털
OTU tables with taxonomy for zooplankton samples drawn from ballast water tanks, including metadata on sampled vessels. This dataset is associated with the following publication: Bailey, S.A., T. Brydges, O. Casas-Monroy, J. Kydd, R.D. Linley, R.M. Rozon, and J. Darling. First evaluation of ballast water management systems on operational ships for minimizing introductions of nonindigenous zooplankton. MARINE POLLUTION BULLETIN. Elsevier Science Ltd, New York, NY, USA, 182: 113947, (2022).
SERC BW data
공공데이터포털
OTU tables with taxonomy for zooplankton samples drawn from ballast water tanks, including metadata on sampled vessels. This dataset is associated with the following publication: Pagenkopp Lohan, K.M., J. Darling, and G.M. Ruiz. International shipping as a potent vector for spreading marine parasites. Diversity and Distributions. Blackwell Publishing Limited, Oxford, UK, 28(9): 1922-1933, (2022).
SERC BW data
공공데이터포털
18S OTU table with taxonomy, including metadata on sampled vessels. This dataset is associated with the following publication: Darling, J., J. Martinson, K. Pagenkopp-Lohan, K. Carney, E. Pilgrim, A. Banerji, K. Holzer, and G. Ruiz. Metabarcoding quantifies differences in accumulation of ballast water borne biodiversity among three port systems in the United States. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 749: 141456, (2020).
DNA metabarcoding OTU tables
공공데이터포털
DNA sequence data output with assigned taxonomic IDs. This dataset is associated with the following publication: Hatzenbuhler, C., J.R. Kelly, J. Martinson, S. Okum, and E. Pilgrim. Sensitivity and accuracy of high-throughput metabarcoding methods for early detection of invasive fish species. Scientific Reports. Nature Publishing Group, UK, 7: 1-10 (46393), (2017).
Lake Superior zooplankton composition data, from 2016, via morphological ID and via DNA metabarcoding
공공데이터포털
Dataset contains site x zooplankton taxa data from Lake Superior in 2016. Different tabs have data from morphological ID and from DNA metabarcoding ID with 4 different genetic markers. This dataset is associated with the following publication: Meredith, C., J. Hoffman, A. Trebitz, E. Pilgrim, S. Okum, and J. Martinson. Evaluating the performance of DNA metabarcoding for assessment of zooplankton communities in Western Lake Superior using multiple markers. Metabarcoding and Metagenomics. Pensoft Publishers, Sofia, BULGARIA, 50: 83-97, (2021).
Mill Creek DNA biodiversity 2016 for SH
공공데이터포털
OTU sequence reads by sample, along with assigned taxonomy. This dataset is associated with the following publication: Bagley, M., E. Pilgrim, M. Knapp, C. Yoder, J. Santodomingo, and A. Banerji. High-throughput environmental DNA analysis informs a biological assessment of an urban stream. ECOLOGICAL INDICATORS. Elsevier Science Ltd, New York, NY, USA, 104: 378-389, (2019).
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