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Current Season Viral Respiratory Vaccinations
A. SUMMARY This dataset represents all San Francisco (SF) residents who have received a vaccine for certain respiratory viruses that circulate more heavily in the fall and winter months. All vaccines given to SF residents are included, even if they received their vaccination elsewhere in California. The data are broken down by demographic and geographical stratifications. COVID-19: This dataset represents all SF residents who are considered up to date on their COVID-19 vaccine. A person is up to date if they have received at least one dose of the 2024–2025 COVID-19 vaccine. The specific up-to-date criteria can be found on the California Department of Public Health (CDPH) website. (Note: As of November 2024, this dataset only contains data regarding COVID-19 vaccinations. This documentation will be updated as other seasonal vaccination data is added). B. HOW THE DATASET IS CREATED Information on doses administered to those who live in SF is from the California Immunization Registry (CAIR2), run by CDPH. The information on individuals’ city of residence, age, race, and ethnicity are also recorded in CAIR and are self-reported at the time of vaccine administration. In order to estimate the percent of San Franciscans vaccinated, we provide the 2018-2022 American Community Survey (ACS) population estimates for each demographic group and analysis neighborhood. C. UPDATE PROCESS Updated daily via automated process. D. HOW TO USE THIS DATASET SF population estimates for race/ethnicity and age groups can be found in a view based on the San Francisco Population and Demographic Census dataset. SF population estimates for analysis neighborhoods can be found in a view based on the San Francisco Population and Geography Census dataset. Both of these views use population estimates from the 2018-2022 5-year ACS. Before analysis, you must filter the dataset to the desired stratification of data using the “vaccine_type” and "demographic_group" columns. For example, filtering “vaccine_type” to “COVID-19” will allow you to only look at rows corresponding to COVID-19 vaccinations. Filtering “demographic_subgroup” to “Analysis Neighborhood” will allow you to only look at rows corresponding to SF neighborhoods. You can then calculate the percentages of those up to date with their COVID-19 vaccinations by neighborhood. The “vaccine_subtype” field provides information about the current vaccine product being tracked in this dataset. E. CHANGE LOG
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ARCHIVED: COVID-19 Vaccinations Given to SF Residents Over Time
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A. SUMMARY This dataset represents the COVID-19 vaccinations given to residents of San Francisco over time. All vaccines given to SF residents are included, no matter where the vaccination took place (the vaccine may have been administered in San Francisco or outside of San Francisco). This dataset also includes COVID-19 vaccinations given to SF residents by the San Francisco Department of Public Health (SFDPH) over time. Data provides counts for residents who have received at least one dose, residents who have completed a primary vaccine series, residents who have received one or two monovalent (not bivalent) booster doses, and residents who have received a bivalent booster dose. A primary vaccine series is complete after an individual has received all intended doses of the initial series. There are one, two, and three dose primary vaccine series. B. HOW THE DATASET IS CREATED Information on doses administered to those who live in San Francisco is from the California Immunization Registry (CAIR2), run by the California Department of Public Health (CDPH). C. UPDATE PROCESS Updated daily via automated process D. HOW TO USE THIS DATASET Before analysis, you must filter the dataset to the desired stratification of data using the "administering_provider_type" column. To get vaccination counts of all SF residents regardless of provider, filter to "administering_provider_type" = ‘All Providers’. To get vaccination counts administered by SFDPH to SF residents, filter to "administering_provider_type" = ‘DPH Only’. To count the number of individuals vaccinated (with any primary series dose) for the first time on a given day, use the "new_recipients" column. To count the number of individuals who have completed their primary vaccine series on a given day, use the "new_series_completed" column. To count the number of primary series doses administered on a day (1st, 2nd, 3rd, or single doses), use the "new_primary_series_doses" column. To count the number of individuals who received their first or second monovalent (not bivalent) booster dose on a given day, use the "new_booster_recipients" and "new_2nd_booster_recipients" columns. To count the number of individuals who received their first bivalent booster dose on a given day, use the "new_bivalent_booster_recipients" column. To count the number of monovalent (not including bivalent) or bivalent booster doses administered on a given day, use the "new_booster_doses" or "new_bivalent_booster_doses" columns. To count the number of individuals who have received a vaccine up to a certain date, use the columns beginning with "cumulative_..." E. ARCHIVED DATA This dataset is a combination of two previous datasets that were archived on 10/27/2022. For historical purposes, you can access the archived datasets at the following links: ARCHIVED: COVID Vaccinations Given to SF Residents Over Time ARCHIVED: COVID Vaccinations Given to SF Residents by SF DPH Over Time F. CHANGE LOG
Respiratory Virus Hospital Admissions Over Time
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A. SUMMARY This dataset includes weekly respiratory disease hospital admissions for Influenza, RSV, and COVID-19 into San Francisco hospitals. Columns in the dataset include a count and rate of hospital admissions per 100,000 people. The data are reported by week. B. HOW THE DATASET IS CREATED Hospital admission data is reported to the San Francisco Department of Public Health (SFDPH) from the United States Center for Disease Control’s (CDC) National Healthcare Safety Network (NHSN) program. San Francisco population estimates are pulled from a view based on the San Francisco Population and Demographic Census dataset. These population estimates are from the 2019-2023 5-year American Community Survey (ACS). C. UPDATE PROCESS The dataset is updated every Friday and includes data from the previous Sunday through Saturday. For example, the update on Friday, October 17th will include data through Saturday, October 11th. Data may change as more current information becomes available. D. HOW TO USE THIS DATASET Weekly data represent a count of confirmed admissions of Influenza, RSV, and COVID-19 patients to San Francisco hospitals by week. The admission rate per 100,000 is calculated by multiplying the count of admissions each week by 100,000 and dividing by the population estimate. E. ARCHIVED DATA A previous version of COVID-19 Hospital Admissions Over TIme dataset was archived. For historical purposes, you can access the archived dataset here.
ARCHIVED: COVID-19 Vaccinations Given to SF Residents by Demographics
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A. SUMMARY This dataset represents the COVID-19 vaccinations given to residents of San Francisco. All vaccines given to SF residents are included, no matter where the vaccination took place (the vaccine may have been administered in San Francisco or outside of San Francisco). The data are broken down by multiple demographic stratifications. This dataset also includes COVID-19 vaccinations given to SF residents by the San Francisco Department of Public Health (SFDPH). Data provides counts for residents who have received at least one dose, residents who have completed a primary vaccine series, residents who have received one or two monovalent (not bivalent) booster doses, and residents who have received a bivalent booster dose. A primary vaccine series is complete after an individual has received all intended doses of the initial series. There are one, two, and three dose primary vaccine series. B. HOW THE DATASET IS CREATED Information on doses administered to those who live in San Francisco is from the California Immunization Registry (CAIR2), run by the California Department of Public Health (CDPH). The information on individuals’ city of residence, age, race, and ethnicity are also recorded in CAIR and are self-reported at the time of vaccine administration. In order to estimate the percent of San Franciscans vaccinated, we provide the 2016-2020 American Community Survey (ACS) population estimates for each demographic group. C. UPDATE PROCESS Updated daily via automated process D. HOW TO USE THIS DATASET San Francisco population estimates for race/ethnicity and age groups can be found in a view based on the San Francisco Population and Demographic Census dataset. These population estimates are from the 2016-2020 5-year American Community Survey (ACS). Before analysis, you must filter the dataset to the desired stratification of data using the "overall_segment" column. For example, filtering "overall_segment" to "All SF Residents by Age Bracket, Administered by All Providers" will filter the data to residents whose vaccinations were administered by any provider. You can then further segment the data and calculate percentages by Age Brackets. If you filter "overall_segment" to "All SF Residents by Race/Ethnicity, Administered by DPH Only", you will see the race/ethnicity breakdown for residents who received vaccinations from the San Francisco Department of Public Health (SFDPH). If you filter "overall_segment" to "All SF Residents by Age Group, Administered by All Providers" you will see vaccination counts of various age eligibility groups that were administered by any provider. To count the number of individuals vaccinated (with any primary series dose), use the "total_recipients" column. To count the number of individuals who have completed their primary vaccine series, use the "total_series_completed" column. To count the number of primary series doses administered (1st, 2nd, 3rd, or single doses), use the "total_primary_series_doses" column. To count the number of individuals who received one or two monovalent (not bivalent) booster doses, use the "total_booster_recipients" and "total_2nd_booster_recipients" columns. To count the number of individuals who received their first bivalent booster dose, use the "total_bivalent_booster_recipients" column. To count the number of monovalent (not including bivalent) or bivalent booster doses administered, use the "total_booster_doses" or "total_bivalent_booster_doses" columns. E. ARCHIVED DATA A previous version of this dataset was archived on 10/27/2022. For historical purposes, you can access the archived dataset at the following link: ARCHIVED: COVID-19 Vaccine Doses Given to San Franciscans by Demographics F. CHA
ARCHIVED: COVID-19 Vaccinations Given to SF Residents by Demographics Over Time
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A. SUMMARY This dataset represents the COVID-19 vaccinations given to residents of San Francisco over time. All vaccines given to SF residents are included, no matter where the vaccination took place (the vaccine may have been administered in San Francisco or outside of San Francisco). The data are broken down by multiple demographic stratifications. This dataset also includes COVID-19 vaccinations given to SF residents by the San Francisco Department of Public Health (SFDPH) over time. Data provides counts for residents who have received at least one dose, residents who have completed a primary vaccine series, residents who have received one or two monovalent (not bivalent) booster doses, and residents who have received a bivalent booster dose. A primary vaccine series is complete after an individual has received all intended doses of the initial series. There are one, two, and three dose primary vaccine series. B. HOW THE DATASET IS CREATED Information on doses administered to those who live in San Francisco is from the California Immunization Registry (CAIR2), run by the California Department of Public Health (CDPH). The information on individuals’ city of residence, age, race, and ethnicity are also recorded in CAIR and are self-reported at the time of vaccine administration. In order to estimate the percent of San Franciscans vaccinated, we provide the 2016-2020 American Community Survey (ACS) population estimates for each demographic group. C. UPDATE PROCESS Updated daily via automated process D. HOW TO USE THIS DATASET San Francisco population estimates for race/ethnicity and age groups can be found in a view based on the San Francisco Population and Demographic Census dataset. These population estimates are from the 2016-2020 5-year American Community Survey (ACS). Before analysis, you must filter the dataset to the desired stratification of data using the "overall_segment" column. For example, filtering "overall_segment" to "All SF Residents by Age Bracket, Administered by All Providers" will filter the data to residents whose vaccinations were administered by any provider. You can then further segment the data and calculate percentages by Age Brackets. If you filter "overall_segment" to "All SF Residents by Race/Ethnicity, Administered by DPH Only", you will see the race/ethnicity breakdown for residents who received vaccinations from the San Francisco Department of Public Health (SFDPH). If you filter "overall_segment" to "All SF Residents by Age Group, Administered by All Providers" you will see vaccination counts of various age eligibility groups that were administered by any provider. To count the number of individuals vaccinated (with any primary series dose) for the first time on a given day, use the "new_recipients" column. To count the number of individuals who have completed their primary vaccine series on a given day, use the "new_series_completed" column. To count the number of primary series doses administered on a day (1st, 2nd, 3rd, or single doses), use the "new_primary_series_doses" column. To count the number of individuals who received their first or second monovalent (not bivalent) booster dose on a given day, use the "new_booster_recipients" and "new_2nd_booster_recipients" columns. To count the number of individuals who received their first bivalent booster dose on a given day, use the "new_bivalent_booster_recipients" column. To count the number of monovalent (not including bivalent) or bivalent booster doses administered on a given day, use the "new_booster_doses" or "new_bivalent_booster_doses" columns. To count the number of individuals who have received a vaccine up to a certain date, use the columns beginning with "cumulative_..." E. ARCHIVED DATA A previous version of this dataset
ARCHIVED: COVID-19 Vaccinations Given to SF Residents by Geography
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A. SUMMARY This dataset represents the COVID-19 vaccinations given to residents of San Francisco summarized by the geographic region of their residential address. All vaccines given to SF residents are included, no matter where the vaccination took place (the vaccine may have been administered in San Francisco or outside of San Francisco). Data provides counts for residents who have received at least one dose, residents who have completed a primary vaccine series, residents who have received one or two monovalent (not bivalent) booster doses, and residents who have received a bivalent booster dose. A primary vaccine series is complete after an individual has received all intended doses of the initial series. There are one, two, and three dose primary vaccine series. B. HOW THE DATASET IS CREATED Information on doses administered to those who live in San Francisco is from the California Immunization Registry (CAIR2), run by the California Department of Public Health (CDPH). The information on individuals’ residential addresses is recorded in CAIR and are self-reported at the time of vaccine administration. San Francisco Department of Public Health (SFDPH) then runs additional processes to spatially match each address to a geographical region. In order to estimate the percent of San Francisco residents vaccinated, we provide the 2016-2020 5-year American Community Survey (ACS) population estimates for each analysis neighborhood. C. UPDATE PROCESS Updated daily via automated process D. HOW TO USE THIS DATASET San Francisco population estimates for geographic regions can be found in a view based on the San Francisco Population and Demographic Census dataset. These population estimates are from the 2016-2020 5-year American Community Survey (ACS). This data is grouped by SF residents’ analysis neighborhoods of residence. To query counts of individuals vaccinated by analysis neighborhood, filter to "area_type" = ‘Analysis Neighborhood’, and "id" will contain the analysis neighborhood name. To query summarized counts of all vaccinated individuals in San Francisco and whether the San Francisco Department of Public Health (SFDPH) was able to match their residential address to a location, filter to "area_type" = ‘Summary’. To count the number of individuals vaccinated (with any primary series dose), use the "count_vaccinated" column. To count the number of individuals vaccinated (with any primary series dose) by the San Francisco Department of Public Health (SFDPH), use the "count_vaccinated_by_dph" column. To count the number of individuals who have completed their primary vaccine series, use the "count_series_completed" column. To count the number of individuals who received one or two monovalent (not bivalent) boosters, use the "count_received_booster" and "count_received_2nd_booster" columns. To count the number of individuals who received at least one bivalent booster, use the "count_received_bivalent_booster" columns. E. ARCHIVED DATA A previous version of this dataset was archived on 10/27/2022. For historical purposes, you can access the archived dataset at the following link: ARCHIVED: COVID-19 Vaccines Given to San Franciscans by Geography F. CHANGE LOG
ARCHIVED: San Francisco Vaccine Access Points
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Update Jan 26, 2023: This dataset is no longer being updated. Please visit https://sf.gov/get-vaccinated-against-covid-19 for information on vaccine locations. A. SUMMARY Dataset contains Vaccine Access points in City and County of San Francisco as listed on https://sf.gov/vaccine-sites. This site list is not inclusive of all City Sites, as some mobile sites and other providers may not be included. B. HOW THE DATASET IS CREATED Maintained by City staff. C. UPDATE PROCESS Updated daily via automated process
Respiratory Virus Dashboard Metrics (ARCHIVED)
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__Note__: On April 30, 2024, the Federal mandate for COVID-19 and influenza associated hospitalization data to be reported to CDC’s National Healthcare Safety Network (NHSN) expired. Hospitalization data beyond April 30, 2024, will not be updated on the Open Data Portal. Hospitalization and ICU admission data collected from summer 2020 to May 10, 2023, are sourced from the California Hospital Association (CHA) Survey. Data collected on or after May 11, 2023, are sourced from CDC's National Healthcare Safety Network (NHSN). Data is from the California Department of Public Health (CDPH) Respiratory Virus State Dashboard at https://www.cdph.ca.gov/Programs/CID/DCDC/Pages/Respiratory-Viruses/RespiratoryDashboard.aspx. Data are updated each Friday around 2 pm. For COVID-19 death data: As of January 1, 2023, data was sourced from the California Department of Public Health, California Comprehensive Death File (Dynamic), 2023–Present. Prior to January 1, 2023, death data was sourced from the COVID-19 case registry. The change in data source occurred in July 2023 and was applied retroactively to all 2023 data to provide a consistent source of death data for the year of 2023. Influenza death data was sourced from the California Department of Public Health, California Comprehensive Death File (Dynamic), 2020–Present. COVID-19 testing data represent data received by CDPH through electronic laboratory reporting of test results for COVID-19 among residents of California. Testing date is the date the test was administered, and tests have a 1-day lag (except for the Los Angeles County, which has an additional 7-day lag). Influenza testing data represent data received by CDPH from clinical sentinel laboratories in California. These laboratories report the aggregate number of laboratory-confirmed influenza virus detections and total tests performed on a weekly basis. These data do not represent all influenza testing occurring in California and are available only at the state level.
Respiratory Virus Weekly Report (Archived)
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__Note:__ This dataset has been archived since June 28, 2025 __Data is from the California Department of Public Health (CDPH) Respiratory Virus Weekly Report.__ The report is updated each Friday. __Laboratory surveillance data__: California laboratories report SARS-CoV-2 test results to CDPH through electronic laboratory reporting. Los Angeles County SARS-CoV-2 lab data has a 7-day reporting lag. Test positivity is calculated using SARS-CoV-2 lab tests that has a specimen collection date reported during a given week. Laboratory surveillance for influenza, respiratory syncytial virus (RSV), and other respiratory viruses (parainfluenza types 1-4, human metapneumovirus, non-SARS-CoV-2 coronaviruses, adenovirus, enterovirus/rhinovirus) involves the use of data from clinical sentinel laboratories (hospital, academic or private) located throughout California. Specimens for testing are collected from patients in healthcare settings and do not reflect all testing for influenza, respiratory syncytial virus, and other respiratory viruses in California. These laboratories report the number of laboratory-confirmed influenza, respiratory syncytial virus, and other respiratory virus detections and isolations, and the total number of specimens tested by virus type on a weekly basis. Test positivity for a given week is calculated by dividing the number of positive COVID-19, influenza, RSV, or other respiratory virus results by the total number of specimens tested for that virus. Weekly laboratory surveillance data are defined as Sunday through Saturday. __Hospitalization data__: Data on COVID-19 and influenza hospital admissions are from Centers for Disease Control and Prevention’s (CDC) National Healthcare Safety Network (NHSN) Hospitalization dataset. The requirement to report COVID-19 and influenza-associated hospitalizations was effective November 1, 2024. CDPH pulls NHSN data from the CDC on the Wednesday prior to the publication of the report. Results may differ depending on which day data are pulled. Admission rates are calculated using population estimates from the P-3: Complete State and County Projections Dataset provided by the State of California Department of Finance (https://dof.ca.gov/forecasting/demographics/projections/). Reported weekly admission rates for the entire season use the population estimates for the year the season started. For more information on NHSN data including the protocol and data collection information, see the CDC NHSN webpage (https://www.cdc.gov/nhsn/index.html). CDPH collaborates with Northern California Kaiser Permanente (NCKP) to monitor trends in RSV admissions. The percentage of RSV admissions is calculated by dividing the number of RSV-related admissions by the total number of admissions during the same period. Admissions for pregnancy, labor and delivery, birth, and outpatient procedures are not included in total number of admissions. These admissions serve as a proxy for RSV activity and do not necessarily represent laboratory confirmed hospitalizations for RSV infections; NCKP members are not representative of all Californians. Weekly hospitalization data are defined as Sunday through Saturday. __Death certificate data__: CDPH receives weekly year-to-date dynamic data on deaths occurring in California from the CDPH Center for Health Statistics and Informatics. These data are limited to deaths occurring among California residents and are analyzed to identify influenza, respiratory syncytial virus, and COVID-19-coded deaths. These deaths are not necessarily laboratory-confirmed and are an underestimate of all influenza, respiratory syncytial virus, and COVID-19-associated deaths in California. Weekly death data are defined as Sunday through Saturday. __Wastewater data__: This dataset represents statewide weekly SARS-CoV-2 wastewater summary values. SARS-CoV-2 wastewater concentrations from all sites in California are combined into a single, statewide, unit-less summary value for each week, using