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F3/AFFF & Zebrafish-Based Platform
F3/AFFF & Zebrafish-Based Platform. This dataset is associated with the following publication: Niaz , K., D. McAtee, P. Adhikari, P. Rollefson, M. Ateia , and A. Abdelmoneim. Assessing the effects of fluorine-free and PFAS-containing firefighting foams on development and behavioral responses using a zebrafish-based platform. CHEMOSPHERE. Elsevier Science Ltd, New York, NY, USA, 365: 143361, (2024).
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Using Zebrafish to Screen Developmental Toxicity of Per- and Polyfluoroalkyl Substances (PFAS)
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Figure S1: BMC curves. Table S1: Fish assessments. Table S2: Data to make visualization of toxicity (Figure 3). Table S3: Data to make BMC curves. This dataset is associated with the following publication: Britton, K., R. Judson, B. Hill, K. Jarema, J. Olin, B. Knapp, M. Lowery, M. Feshuk, J. Brown, and S. Padilla. Using Zebrafish to Screen Developmental Toxicity of Per- and Polyfluoroalkyl Substances (PFAS). Toxics. MDPI, Basel, SWITZERLAND, 12(7): 501, (2024).
Zebrafish Locomotor Responses Reveal Irritant Effects of Fine PM Extracts and a Role for TRPA1
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This dataset contains 60-min locomotor response data for all control, chemical and particulate-extract-treated zebrafish. This dataset is associated with the following publication: Stevens, J., S. Padilla, D. DeMarini, D. Hunter, K. Martin, L. Thompson, I. Gilmour, M. Hazari, and A. Farraj. Zebrafish Locomotor Responses Reveal Irritant Effects of Fine Particulate Matter Extracts and a Role for TRPA1. TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA, 161(2): 290-299, (2018).
Influence of Methylene Blue or Dimethyl Sulfoxide on Larval Zebrafish Development and Behavior
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Data for Joan M. Hedge, et al., Influence of Methylene Blue or Dimethyl Sulfoxide on Larval Zebrafish Development and Behavior. Zebrafish. http://doi.org/10.1089/zeb.2023.0017. This dataset is associated with the following publication: Hedge, J., D. Hunter, E. Sanders, K. Jarema, J. Olin, K. Britton, M. Lowery, B. Knapp, S. Padilla, and B. Hill. Influence of Methylene Blue or Dimethyl Sulfoxide on Larval Zebrafish Development and Behavior. Zebrafish. Mary Ann Liebert, Inc., New Rochelle, NY, USA, 20(4): 132-145, (2023).
CatronTara A-brvd MB2Dataset 20180221
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This file contains data used to generate figures shown in Catron et al. Characterization of host toxicity and microbiota disruption in larval zebrafish following developmental exposure to BPA and BPA alternatives. This dataset is associated with the following publication: Catron, T., S. Keely, N. Brinkman, T. Zurlinden, C. Wood, J. Wright, D. Phelps, E. Wheaton, A. Kvasnicka, S. Gaballah, R. Lamendella, and T. Tal. Host Developmental Toxicity of BPA and BPA Alternatives Is Inversely Related to Microbiota Disruption in Zebrafish. TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA, 167(2): 468-483, (2019).
A Roadmap to the Structure-Related Metabolism Pathways of Per- and Polyfluoroalkyl Substances in Early Life Stages of Zebrafish (Danio rerio)
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Our findings identified five structural categories of PFAS prone to metabolism. The metabolism pathways of PFAS are highly related to their structures and significantly impact their bioaccumulations and toxicities. We also verified CES1 as an enzyme capable of hydrolyzing diverse PFAS, with strong substrate preferences towards perfluoroalkyl amides. This dataset is not publicly accessible because: Data generated by external academic lab with chemicals provided by EPA under an MTA. EPA’s contribution was providing the PFAS library. It can be accessed through the following means: Contact the corresponding author Hui Peng, Mailing address: Department of Chemistry, University of Toronto, Toronto, Ontario, M5S3H6, Canada. E-mail address: hui.peng@utoronto.ca. Format: Not available. This dataset is associated with the following publication: Han, J., W. Gu, H. Barrett, D. Yang, S. Tang, J. Sun, J. Liu, H. Krause, K. Houck, and H. Peng. A Roadmap to the Structure-Related Metabolism Pathways of Per- and Polyfluoroalkyl Substances in the Early Life Stages of Zebrafish (Danio rerio). ENVIRONMENTAL HEALTH PERSPECTIVES. National Institute of Environmental Health Sciences (NIEHS), Research Triangle Park, NC, USA, 129(7): 077004, (2021).
Raw Data for Jarema et al, 2022 Developmental Neurotoxicity and Behavioral Screening in Larval Zebrafish...
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The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/toxics10050256/s1. Figure S1, Effect of DMSO on Light/Dark Locomotor Activity; Figure S2, Time Course Behavioral Graph, Activity Box Plots and Developmental Toxicity for each Chemical; Table S1, Raw Data. This dataset is associated with the following publication: Jarema, K., D. Hunter, B. Hill, J. Olin, K. Britton, M. Waalkes, and S. Padilla. Developmental Neurotoxicity and Behavioral Screening in Larval Zebrafish with a Comparison to Other Published Results. Toxics. MDPI, Basel, SWITZERLAND, 10(5): 256, (2022).
Cell-Based Metabolomics for Untargeted Screening and Prioritization of Vertebrate-Active Stressors in Streams Across the United States
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Extents of impact, as measured by NMR spectroscopy, on the Zebrafish liver cell endogenous metabolite profiles resulting from exposure to the 38 stream waters, along with numbers of anthropogenic organic chemicals detected at each site. Also, a summary of chemicals detected by class is included, along with statistics on their occurances in the group of stressors that most-strongly covary with changes in endogenous metabolite profiles. This dataset is associated with the following publication: Collette, T., D. Ekman, H. Zhen, H. Nguyen, P.M. Bradley, and Q. Teng. Cell-Based Metabolomics for Untargeted Screening and Prioritization of Vertebrate-Active Stressors in Streams Across the United States. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 53(15): 9232-9240, (2019).
Data for Barron et al. "Photoenhanced toxicity of weathered crude oil in sediment and water to larval zebrafish" submitted to the Bulletin of Environmental Contamination and Toxicology
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The dataset contains fish mortality associated with various treatment of oil and dispersants in water accommodated fractions and sediment. The dataset also contains analytical chemistry associated with each experimental treatment. This dataset is associated with the following publications: Barron, M. Photoenhanced Toxicity of Petroleum to Aquatic Invertebrates and Fish. ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY. Springer, New York, NY, USA, 73(1): 40-46, (2017). Barron, M., J. Kryzwa, C. Lilavois, and S. Raimondo. Photoenhanced toxicity of weathered crude oil in sediment and water to larval zebrafish. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY. Springer, New York, NY, USA, 100(1): 49-53, (2018).
Effects of temperature and exposure duration on four potential rapid-response tools for zebra mussel (Dreissena polymorpha) eradication: Data
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Zebra mussels (Dreissena polymorpha) have continued their spread within inland lakes and rivers in North America despite diligent containment and decontamination efforts by natural resource agencies and other stakeholders. Identification of newly infested waterways with early detection surveillance programs allows for rapid response zebra mussel eradication treatments in some situations. Previous eradication treatments have been conducted during times of variable water temperatures and temperature has been shown to influence the efficacy of molluscicides. Natural resource managers would benefit from knowledge regarding the impacts of water temperature and exposure duration on toxicity of molluscicides to zebra mussels. In particular, temperature specific data are needed to inform the selection of an effective molluscicide and the proper dose that will induce 100% zebra mussel mortality. We evaluated the influences of temperature and exposure duration on the toxicity of two EPA-registered (EarthTec QZ and Zequanox) and two nonregistered (niclosamide and potassium chloride) molluscicides to zebra mussels at water temperatures of 7, 12, 17, and 22 °C. Our results indicate that treatment options for the eradication of zebra mussels in waters ≤ 12 °C include 336 h or longer treatments with EarthTec QZ and KCl and treatments with niclosamide ≥ 24 h in duration. In waters ≥ 17 °C, multiple toxicant and exposure duration combinations would be effective for zebra mussel eradication treatments. However, site specific variables should be considered prior to treatment including: the extent of the infestation, water chemistry, aquatic vegetation, substrate, and the presence of nontarget organisms. The use of on-site or in situ zebra mussel bioassays would also be a useful tool for the evaluation of treatment efficacy. The dataset includes: Water Quality, Chemical Concentrations, Mortality, and Zebra Mussel Condition Data
Dataset for A rapid assessment bioaccumulation screening (RABS) study design for emerging per-and polyfluoroalkyl substances in mice exposed to industrially impacted surface water
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All data tables are available in the publication and uploaded onto ScienceHub. This dataset is associated with the following publication: Bangma, J., T.C. Guillette, M. Strynar, A. Lindstrom, J. McCord, D. Jenkins-Hill, C. Lau, N. Chernoff, and J. Lang. A rapid assessment bioaccumulation screening (RABS) study design for emerging per-and polyfluoroalkyl substances in mice exposed to industrially impacted surface water. CHEMOSPHERE. Elsevier Science Ltd, New York, NY, USA, 308(1): 136159, (2022).