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POPs data for salmonids and macroinvertebrates from Glacier Bay, Alaska - Measuring persistent organic pollutants in resident salmonids and benthic macroinvertebrates in streams near Glacier National Park, Alaska
A 2007 pilot study was initiated by the University of Alaska – Southeast in which baseline levels of contaminants, including persistent organic pollutants (POPs) and total mercury, were determined in whole bodies of juvenile coho salmon collected in streams in and near national park units in the Southeast Alaska Inventory and Monitoring Network. Although the concentrations of POPs determined in the juvenile coho were relatively low (< 10 ng/g, wet weight), the preliminary findings of this study indicate that, in the Glacier National Park region, salmon from streams with higher density of spawners had increased levels of certain banned chlorinated pesticides (i.e., alpha-chlordane, o,p’-DDT, p,p’-DDD) compared to salmon collected in other streams with lower salmon spawning density. A follow up study will be initiated in spring/summer 2015 to determine concentrations of POPs in resident salmonids, as well as benthic macroinvertebrates collected from five streams that have fish barriers near or adjacent to Glacier National Park. Comparisons in contaminant concentrations and patterns will be made for fish collected below and above the barrier in each stream to help determine if certain classes of POPs are being transported by the spawners. As part of this study, the NWFSC will analyze whole bodies/muscle of salmonids and benthic macroinvertebrate samples POPs using gas chromatography / mass spectrometry (GC/MS). Percent lipid content of samples (with adequate sample mass) will also be determined. These data will be included in a report to the NIH-sponsored IDeA Network of Biomedical Research Excellence. Determining levels of persistent organic pollutants in salmonids and macroinvertebrates.
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Length, Weight, Energy Density, and Isotopic Values of Fish from Rivers in Northwest Alaska, 2015-2019
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This dataset contains length, weight, energy density, and isotope values of fish collected in northwest Alaskan rivers during summer and fall 2015-2019.
Concentrations of environmental DNA (eDNA) during sockeye salmon spawning in 2016, Hansen Creek, Alaska, USA
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This dataset contains environmental DNA (eDNA) concentrations and spawning adult abundances for sockeye salmon (Oncorhynchus nerka) in Hansen Creek, a small tributary in the Wood River watershed, southeast Alaska, USA. We took temporally- and spatially-replicated eDNA samples during the spawning period (mid-July through August), along with fish counts (live, naturally dead, and killed), dissolved oxygen (DO), discharge, and temperature data at each time of sampling. Samples were collected at each site before adults entered the stream, and then continued to be collected daily or every other day for the next three weeks.
Concentrations of environmental DNA (eDNA) during sockeye salmon spawning in 2016, Hansen Creek, Alaska, USA
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This dataset contains environmental DNA (eDNA) concentrations and spawning adult abundances for sockeye salmon (Oncorhynchus nerka) in Hansen Creek, a small tributary in the Wood River watershed, southeast Alaska, USA. We took temporally- and spatially-replicated eDNA samples during the spawning period (mid-July through August), along with fish counts (live, naturally dead, and killed), dissolved oxygen (DO), discharge, and temperature data at each time of sampling. Samples were collected at each site before adults entered the stream, and then continued to be collected daily or every other day for the next three weeks.
AFSC/REFM: Nearshore fish survey in northern Bristol Bay, Alaska, July-August 2009
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The project consisted of a nearshore fish, invertebrate, and habitat survey in northern Bristol Bay, Alaska. A 32-ft. gillnet vessel, the F/V Willow was chartered for the survey, and we also used a 20-ft. aluminum skiff with 90-hp. motor for shallow water work. The survey was staged out of Dillingham, Alaska and took place from July 26-August 8, 2009.The main gear types used during the survey were a beach seine and a bottom beam trawl. A surface pair trawl (towed by the vessel and the skiff) was deployed in one location. Using these gear types, we sampled from the shoreline to 17 m depth, as well as surface waters ~1 km from the shoreline. Catches were sorted to species, enumerated, and when possible weighed using spring scales. Length measurements were taken for most species. Voucher specimens were preserved in 10% formalin for confirmation of species identification. A small number of samples were frozen for age and energetics analysis . Photographs were taken of most species. Small, datalogging conductivity-temperature-depth recorders (CTDs) were deployed on the trawl gear, and also placed on temporary moorings in several locations to study fluctuations in temperature and salinity over tidal cycles. We also recorded habitat variables at beach seine sites according to the methodology used in the Nearshore Fish Atlas of Alaska. During July 26-August 1, 2009 sampling was conducted in Nushagak Bay. High wind and waves hampered the sampling throughout this entire week and largely determined possible sampling locations. Two days were completely lost due to weather. On August 3 we traveled from Dillingham to the west side of the Nushagak and from August 4-8 sampling was conducted along the Nushagak Peninsula and in Kulukak, Nunavachak, Ungalikthluk, and Togiak Bays. During most of this time we experienced high winds but they did not hamper the sampling to the same degree as in the Nushagak. On August 8 we traveled back to Dillingham.
Macroinvertebrates from Streams and Springs in the 1002 Region of the Arctic National Wildlife Refuge, Alaska, 2021
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This dataset includes tables related to macroinvertebrate collections in streams and springs of the 1002 region of the Arctic National Wildlife Refuge in northeastern Alaska. Macroinvertebrates were collected using kicknets and driftnets in April and August with the goal of comparing populations to those sampled from the same water bodies by the USGS in the 1970s.
Macroinvertebrates from Streams and Springs in the 1002 Region of the Arctic National Wildlife Refuge, Alaska, 2021
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This dataset includes tables related to macroinvertebrate collections in streams and springs of the 1002 region of the Arctic National Wildlife Refuge in northeastern Alaska. Macroinvertebrates were collected using kicknets and driftnets in April and August with the goal of comparing populations to those sampled from the same water bodies by the USGS in the 1970s.
Southeast Alaska ESI: FISHL (Fish Lines)
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This data set contains biological resource data for anadromous fish streams in Southeast Alaska. Vector lines in this data set represent locations of fish streams. Species-specific abundance, seasonality, status, life history, and source information are stored in relational data tables (described below) designed to be used in conjunction with this spatial data layer.This data set comprises a portion of the Environmental Sensitivity Index (ESI) data for Southeast Alaska. ESI data characterize the marine and coastal environments and wildlife by their sensitivity to spilled oil. The ESI data include information for three main components: shoreline habitats, sensitive biological resources, and human-use resources. See also the FISH (Fish Polygons) and FISHPT (Fish Points) data layers, part of the larger Southeast Alaska ESI database, for additional fish information.
AFSC/ABL: Salmonid migrations at Auke Creek, Alaska
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The Auke Lake system has endemic populations of pink, chum, sockeye and coho salmon, and supports populations of Dolly Varden char and cutthroat and steelhead trout. The National Marine Fisheries Service (NMFS), and its predecessor agency, U.S. Bureau of Commercial Fisheries, began salmon research at Auke Creek, near Juneau, Alaska, in 1961. There are emigrant and immigrant counts of several species over nearly five decades (Appendices 1 and 2). Pink salmon fry populations at Auke Creek were estimated annually, 1972-79, and counted at the weir since 1980. Fyke nets were used capture sockeye salmon smolts leaving Auke Lake, and estimates are available for some years between 1961 and 1979. Total sockeye smolt counts are available since 1980. Chum salmon fry were counted annually since 1985. Coho salmon smolt estimates were made in 1976, 1977, and 1979, and the total coho smolt emigration was counted since 1980. Dolly Varden char and cutthroat trout were counted in 1970 and since 1980. Steelhead emigrants were counted since 1990. Weir counts of sockeye salmon adults at Auke Creek began in 1963; pink and chum salmon were counted 1967-68, and all salmon were counted since 1971. Chinook salmon entered Auke Creek since 1987 as a result of releases of juveniles from other hatcheries. Immigrant Dolly Varden and cutthroat and steelhead trout were counted from 1997-2006. Auke Creek is the site of many research projects on wild and hatchery salmonids. The present weir at Auke Creek was constructed in 1980, and provided the capability to capture all emigrant and immigrant salmonids. Annual operations and maintenance costs associated with Auke Creek Research Station are provided by NMFS through the salmon research program of Auke Bay Laboratory. Projects at Auke Creek between 1971 and 1983 operated under several cooperative agreements. An interagency cooperative agreement relating to Auke Creek weir was established in 1983 between the NMFS, University of Alaska-Fairbanks (UAF), and Alaska Department of Fish and Game (ADFG). The agreement provided the authority to jointly fund a full-time person to assist with the operation of the fish counting weir at Auke Creek. The primary objective is to operate the weir on a daily basis and maintain the long-term data collections on migrant salmonids. Auke Creek weir usually operates from early March through late October. A report of fish counts from daily weir operations and other information related to salmonid research involving the facilities at the weir is prepared each year. The annual fish count data are available in the Auke Creek data file at the NMFS Auke Bay Laboratory. Data collected on specific projects outside the scope of the cooperative agreements are usually not included in the annual report. Those data may be available from project investigators or their respective agencies.
Western Alaska ESI: FISHL (Fish Lines)
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This data set contains sensitive biological resource data for anadromous fish species in Western Alaska. Vector lines in this data set represent species occurrences in rivers and streams. Species-specific abundance, seasonality, status, life history, and source information are stored in relational data tables (described below) designed to be used in conjunction with this spatial data layer. This data set comprises a portion of the Environmental Sensitivity Index (ESI) data for Western Alaska. ESI data characterize the marine and coastal environments and wildlife by their sensitivity to spilled oil. The ESI data include information for three main components: shoreline habitats, sensitive biological resources, and human-use resources. See also the FISH (Fish Polygons) data layer, part of the larger Western Alaska ESI database, for additional anadromous fish information.
Southeast Alaska ESI: FISH (Fish Polygons)
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This data set contains biological resource data for estuarine, benthic, and pelagic fish in Southeast Alaska. Vector polygons in this data set represent locations of fish concentration areas. Species-specific abundance, seasonality, status, life history, and source information are stored in relational data tables (described below) designed to be used in conjunction with this spatial data layer.This data set comprises a portion of the Environmental Sensitivity Index (ESI) data for Southeast Alaska. ESI data characterize the marine and coastal environments and wildlife by their sensitivity to spilled oil. The ESI data include information for three main components: shoreline habitats, sensitive biological resources, and human-use resources. See also the FISHL (Fish Lines) and FISHPT (Fish Points) data layers, part of the larger Southeast Alaska ESI database, for additional fish information.