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Hydrological Areas of Nevada for the Greater Sage-grouse
The Great Basin is characterized by strong patterns of precipitation along approximate north-south gradients (Miller and others, 2013). Hence, we used a hydrographic boundary layer developed by Mason (1999), to divide the region-wide extent of sage-grouse habitat mapping analysis into North and South regions that align coarsely with respective mesic (wet) and xeric (dry) regions of the state. Flood regions are based largely on patterns of snowmelt, summer thunderstorms or cyclonic rainfall, and the 8-digit Watershed Boundary Dataset (WBD, 2015) was used to select appropriate watersheds within our mapping extent that corresponded to the Mason (1999) boundary. Slight adjustments, made in ArcMap 10.3, included joining region 2 and 3 to comprise the majority of the North region (where a relatively low number of sampled sites precluded keeping regions 2 and 3 separate), and pooling the more xeric Owyhee Desert (located in the center of the northern part of Nevada) within the drier South region. Use of the hydrographic boundary allowed for an accounting of broad-scale variation in habitat availability and selection patterns for sage-grouse (for example, habitat classified as highly suitable in wet areas could be classified as less suitable in drier areas because these habitats are less available). Interim statewide habitat suitability maps were clipped by the hydrographic boundary and relativized according to their respective maximum values for map classification purposes (see Coates and others 2014), the independent set of sage-grouse telemetry points was also split by the hydrographic boundary. For the spring map, 837 points informed the North region while 794 informed the South region. For the summer map, 604 points informed the North and 794 the South. For winter, 326 informed the North and 411 the South. For our composite annual map made from the multiplicative product of the seasonal maps, 1767 points were used for the North and 1999 for the South. References: Coates, P.S., Casazza, M.L., Brussee, B.E., Ricca, M.A., Gustafson, K.B., Overton, C.T., Sanchez-Chopitea, E., Kroger, T., Mauch, K., Niell, L., Howe, K., Gardner, S., Espinosa, S., and Delehanty, D.J. 2014, Spatially explicit modeling of greater sage-grouse (Centrocercus urophasianus) habitat in Nevada and northeastern California—A decision-support tool for management: U.S. Geological Survey Open-File Report 2014-1163, 83 p., http://dx.doi.org/10.3133/ofr20141163. ISSN 2331-1258 (online) Mason, R.R. 1999. The National Flood-Frequency Program—Methods For Estimating Flood Magnitude And Frequency In Rural Areas In Nevada U.S. Geological Survey Fact Sheet 123-98 September, 1999, Prepared by Robert R. Mason, Jr. and Kernell G. Ries III, of the U.S. Geological Survey; and Jeffrey N. King and Wilbert O. Thomas, Jr., of Michael Baker, Jr., Inc. http://pubs.usgs.gov/fs/fs-123-98/ Miller RF, Chambers JC, Pyke DA, Pierson FB, Williams CJ. 2013. A review of fire effects on vegetation and soils in the Great Basin Region: response and ecological site characteristics. Gen. Tech. Rep. RMRS-GTR-308. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. http://www.fs.fed.us/rm/pubs/rmrs_gtr308.html. WBD, 2015. Coordinated effort between the United States Department of Agriculture-Natural Resources Conservation Service (USDA-NRCS), the United States Geological Survey (USGS), and the Environmental Protection Agency (EPA). The Watershed Boundary Dataset (WBD) was created from a variety of sources from each state and aggregated into a standard national layer for use in strategic planning and accountability. Watershed Boundary Dataset for {HUC#8}, Nevada_ST.zip [ftp://rockyftp.cr.usgs.gov/vdelivery/Datasets/Staged/Hydro/FileGDB101/]. Available URL: http://datagateway.nrcs.usda.gov [Accessed 01/10/2015].
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Sub regions for Greater Sage-grouse in Nevada and California (August 2014)
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Spatial associations between marked sage-grouse and existing PMU boundaries (Nevada Department of Wildlife, 2014) were used as an initial starting point for delineating subregions for habitat selection analyses and naming conventions across Nevada and northeastern California (fig. 3). Ultimately, the data were partitioned into 19 subregions based on movement patterns of individual radio-marked sage-grouse for habitat analyses, with each grouse occupying one subregion only. Some subregions contained too few marked sage-grouse for sufficient training data to develop a habitat model, which resulted in the exclusion of seven subregions with fewer than 20 marked sage-grouse or less than 100 telemetry locations. However, data from these excluded ‘non-RSF’ subregions were sufficient to provide further validation of the region-wide model in areas that were not used to train the model. After data-screening, we included telemetry data from 12 subregions in the habitat training models: Buffalo-Skedaddle, Butte-Buck-White Pine, Cortez, Desert-Tuscarora, Gollaher-O’Neil, Lincoln-Schell-Snake, Lone Willow, Midway, Sheldon, South Fork-Ruby Valley, Toiyabe, and Virginia Mountains (fig. 4). The spatial extent of habitat availability for use in habitat modeling was defined by first calculating a minimum convex polygon (MCP) that encompassed all telemetry locations within each subregion, and then buffering each MCP by the maximum average daily sage-grouse movement (1,451 m). Using the MCP to identify the study extent is a common and useful approach for habitat studies (Aebischer and others, 1993), and buffering by the maximum average daily movement helps ameliorate underestimation of habitat availability.NOTE: This file does not include habitat areas for the Bi-State management area.Coates, P.S., Casazza, M.L., Brussee, B.E., Ricca, M.A., Gustafson, K.B., Overton, C.T., Sanchez-Chopitea, E., Kroger, T., Mauch, K., Niell, L., Howe, K., Gardner, S., Espinosa, S., and Delehanty, D.J. 2014, Spatially explicit modeling of greater sage-grouse (Centrocercus urophasianus) habitat in Nevada and northeastern California—A decision-support tool for management: U.S. Geological Survey Open-File Report 2014-1163, 83 p., http://dx.doi.org/10.3133/ofr20141163. ISSN 2331-1258 (online)
Modifed Great Basin Extent (Buffered)
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Two different great basin perimeter files were intersected and dissolved using ArcGIS 10.2.2 to create the outer perimeter of the great basin for use modeling long-term wildfire effects on sage-grouse population growth, and development of sage-grouse concentration areas based on modeled habitat quality, lek density, and population abundance (Coates et al. 2015). These two perimeter files included a 1:1,000,000 map of hydrographic areas in the Great Basin) (Buto 2009), and vegetation characteristics (Karl et al. 2001). The resulting Modified Great Basin Extent represented a combination of hydrographic and floristic features best suited for the defining the spatial extent of the analyses. To ensure moving window analyses of habitat and fire areas covered the entire extent, the extent was then buffered by 15.8 km. The extent also encompasses large parts of sage-grouse management zones III (Southern Great Basin), IV (Snake River Plain), and V (Northern Great Basin). A small portion (< 5%) of management zone II (Wyoming Basins) is also encompassed. REFERENCES Buto, S.G., 2009, Digital Representation of 1:1,000,000-scale Hydrographic Areas of the Great Basin: U.S. Geological Survey Data Series 457, 5 p .http://pubs.usgs.gov/ds/457 Coates, P.S., Ricca, M.A., Prochazka, B.G., Doherty, K. D., Brooks, M.L., Casazza, M.L. 2015. Long-term effects of wildfire on greater sage-grouse - integrating population and ecosystem concepts for management in Great Basin. http://pubs.er.usgs.gov/publication/ofr20151165 Karl, M., Durtsche, B.M., Morgan, K. 2001. Great Basin Restoration Initiative Area. http://sagemap.wr.usgs.gov/SearchData.aspx
1:1,000,000-scale Hydrographic Areas of the Great Basin
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This data set consists of hydrographic area and major flow system boundaries and polygons delineated at 1:1,000,000-scale for the Great Basin.
Habitat Categories for Greater Sage-grouse in Nevada and California (August 2014)
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Sage-Grouse habitat areas divided into proposed management categories within Nevada and California project study boundaries.HABITAT CATEGORY DETERMINATIONThe process for category determination was directed by the Nevada Sagebrush Ecosystem Technical team. Sage-grouse habitat was determined from a statewide resource selection function model and first categorized into 4 classes: high, moderate, low, and non-habitat. The standard deviations (SD) from a normal distribution of RSF values created from a set of validation points (10% of the entire telemetry dataset) were used to categorize habitat ‘quality’ classes. 1) High quality habitat comprised pixels with RSF values < 0.5 SD.2) Moderate > 0.5 and < 1.0 SD. 3) Low < 1.0 . 4) Non-Habitat > 1.5 SD. Coates, P.S., Casazza, M.L., Brussee, B.E., Ricca, M.A., Gustafson, K.B., Overton, C.T., Sanchez-Chopitea, E., Kroger, T., Mauch, K., Niell, L., Howe, K., Gardner, S., Espinosa, S., and Delehanty, D.J. 2014, Spatially explicit modeling of greater sage-grouse (Centrocercus urophasianus) habitat in Nevada and northeastern California—A decision-support tool for management: U.S. Geological Survey Open-File Report 2014-1163, 83 p., http://dx.doi.org/10.3133/ofr20141163. ISSN 2331-1258 (online)REFERENCES Beyer HL. 2012. Geospatial Modelling Environment (Version 0.7.2.0). http://www.spatialecology.com/gmeCoates PS, Casazza ML, Blomberg EJ, Gardner SC, Espinosa SP, Yee JL, Wiechman L, Halstead BJ. 2013. “Evaluating greater sage-grouse seasonal space use relative to leks: Implications for surface use designations in sagebrush ecosystems.” The Journal of Wildlife Management 77: 1598-1609.Doherty KE, Tack JD, Evans JS, Naugle DE. 2010. Mapping breeding densities of greater sage-grouse: A tool for range-wide conservation planning. Bureau of Land Management. Report Number: L10PG00911. Accessed at: http://www.conservationgateway.org/ConservationByGeography/NorthAmerica/Pages/sagegrouse.aspx# Duong T. 2012. ks: Kernel smoothing. R package version 1.8.10. http://CRAN.R-project.org/package=ksHorne JS, Garton EO. 2006. “Likelihood cross-validation versus least squares cross-validation for choosing the smoothing parameter in kernel home-range analysis.” Journal of Wildlife Management 70: 641-648.Silverman BW. 1986. Density estimation for statistics and data analysis. Chapman & Hall, London, United Kingdom.Vander Wal E, Rodgers AR. 2012. “An individual-based quantitative approach for delineating core areas of animal space use.” Ecological Modelling 224: 48-53.NOTE: This file does not include habitat areas for the Bi-State management area.
Study area boundary derived from 1:1,000,000-scale hydrographic areas and flow systems for the Great Basin carbonate and alluvial aquifer system of Nevada, Utah, and parts of adjacent states
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This dataset contains the amalgamation of the hydrographic area (HA) boundaries and polygons for the GBCAAS study area. The study area consists of 165 HAs based on Great Basin HAs defined by the USGS in 1988 (Harrill and others, 1988; Buto, 2009). This dataset does not contain the HA boundaries or geologic details included in the source dataset. For that information, please see the metadata for the source dataset at https://water.usgs.gov/GIS/metadata/usgswrd/XML/sir2010_5193_ha1000.xml The study area boundary dataset is used by the Office of Groundwater, U.S. Geological Survey, in its hyrogeological framework website.
Hydrologic landscape regions of Nevada
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Hydrologic landscape regions group areas according to their similarity in landscape and climate characteristics. These characteristics represent variables assumed to affect hydrologic processes in the environment. Hydrologic landscape regions in Nevada were delineated using geographic information system tools and statistical methods including cluster analysis. The data layers of hydrogeology, precipitation, soil permeability, land surface slope and aspect were used to identify the hydrologic landscape regions. Sixteen hydrologic landscape regions were identified through cluster analysis. The hydrologic landscape regions are noncontiguous in nature and can range from small areas which tend to be in the mountain ranges to very large areas in the basins.
Summer Season Habitat Categories for Greater Sage-grouse in Nevada and northeastern California
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This shapefile represents habitat suitability categories (High, Moderate, Low, and Non-Habitat) derived from a composite, continuous surface of sage-grouse habitat suitability index (HSI) values for Nevada and northeastern California during summer¸ which is a surrogate for habitat conditions during the sage-grouse brood-rearing period. Summary of steps to create Habitat Categories: HABITAT SUITABILITY INDEX: The HSI was derived from a generalized linear mixed model (specified by binomial distribution and created using ArcGIS 10.2.2) that contrasted data from multiple environmental factors at used sites (telemetry locations) and available sites (random locations). Predictor variables for the model represented vegetation communities at multiple spatial scales, water resources, habitat configuration, urbanization, roads, elevation, ruggedness, and slope. Vegetation data was derived from various mapping products, which included NV SynthMap (Petersen 2008, SageStitch (Comer et al. 2002, LANDFIRE (Landfire 2010), and the CA Fire and Resource Assessment Program (CFRAP 2006). The analysis was updated to include high resolution percent cover within 30 x 30 m pixels for Sagebrush, non-sagebrush, herbaceous vegetation, and bare ground (C. Homer, unpublished; based on the methods of Homer et al. 2014, Xian et al. 2015 ) and conifer (primarily pinyon-juniper, P. Coates, unpublished). The pool of telemetry data included the same data from 1998 - 2013 used by Coates et al. (2014); additional telemetry location data from field sites in 2014 were added to the dataset. The dataset was then split according calendar date into three seasons (spring, summer, winter). Summer included telemetry locations (n = 11,743) from July to mid-October. All age and sex classes of marked grouse were used in the analysis. Sufficient data (i.e., a minimum of 100 locations from at least 20 marked Sage-grouse) for modeling existed in 10 subregions for spring and summer, and seven subregions in winter, using all age and sex classes of marked grouse. It is important to note that although this map is composed of HSI values derived from the seasonal data, it does not explicitly represent habitat suitability for reproductive females (i.e., nesting and with broods). Insufficient data were available to allow for estimation of this habitat type for all seasons throughout the study area extent. A Resource Selection Function (RSF) was calculated for each subregion using R software (v 3.13) and using generalized linear models to derive model-averaged parameter estimates for each covariate across a set of additive models. Subregional RSFs were transformed into Habitat Suitability Indices, and averaged together to produce an overall statewide HSI whereby a relative probability of occurrence was calculated for each raster cell during the summer season. In order to account for discrepancies in HSI values caused by varying ecoregions within Nevada, the HSI was divided into north and south extents using a slightly modified flood region boundary (Mason 1999) that was designed to represent respective mesic and xeric regions of the state. North and south HSI rasters were each relativized according to their maximum value to rescale between zero and one, then mosaicked once more into a state-wide extent. HABITAT CATEGORIZATION: Using the same ecoregion boundaries described above, the habitat classification dataset (an independent data set comprising 10% of the total telemetry location sample) was split into locations falling within respective north and south regions. HSI values from the composite and relativized statewide HSI surface were then extracted to each classification dataset location within the north and south region. The distribution of these values were used to identify class break values corresponding to 0.5 (high), 1.0 (moderate), and 1.5 (low) standard deviations (SD) from the mean HSI. These class breaks were used to classify the HSI surface into four discrete categories
Management Categories for Greater Sage-grouse in Nevada and California (August 2014)
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Sage-Grouse habitat areas divided into proposed management categories within Nevada and California project study boundaries.MANAGEMENT CATEGORY DETERMINATION The process for category determination was directed by the Nevada Sagebrush Ecosystem Technical team. Sage-grouse habitat was determined from a statewide resource selection function model and first categorized into 4 classes: high, moderate, low, and non-habitat. The standard deviations (SD) from a normal distribution of RSF values created from a set of validation points (10% of the entire telemetry dataset) were used to categorize habitat ‘quality’ classes. High quality habitat comprised pixels with RSF values < 0.5 SD, Moderate > 0.5 and < 1.0 SD, Low < 1.0 and > 1.5, Non-Habitat > 1.5 SD. Proposed Habitat Management Categories were then defined and calculated as follows.1) Core habitat: Defined as the intersection between all suitable habitat (high, moderate, and low) and the 85% Space Use Index (SUI). 2) Priority habitat: Defined as all high quality falling outside the 85% SUI and all non-habitat falling within the 85% SUI. 3) General habitat: Defined as moderate and low quality habitat falling outside the 85% SUI. 4) Non habitat. Defined as non-habitat falling outside the 85% SUI. SPACE USE INDEX CALCULATIONLek coordinates and associated trend count data were obtained from the 2013 Nevada Sage-grouse Lek Database compiled by the Nevada Department of Wildlife (NDOW, S. Espinosa, 9/10/2013). We queried the database for leks with a ‘LEKSTATUS’ field classified as ‘Active’ or ‘Pending’. Active leks comprised leks with breeding males observed within the last 5 years. Pending leks comprised leks without consistent breeding activity during the prior 3 – 5 surveys or had not been surveyed during the past 5 years; these leks typically trended towards ‘inactive’. A sage-grouse management area (SGMA) was calculated by buffering Population Management Units developed by NDOW by 10km. This included leks from the Buffalo-Skedaddle PMU that straddles the northeastern California – Nevada border, but excluded leks for the Bi-State Distinct Population Segment. The 5-year average (2009 – 2013) for the number of males grouse (or unknown gender if males were not identified) attending each lek was calculated. The final dataset comprised 907 leks. Utilization distributions describing the probability of lek occurrence were calculated using fixed kernel density estimators (Silverman 1986) with bandwidths estimated from likelihood based cross-validation (CVh) (Horne and Garton 2006). UDs were weighted by the 5-year average (2009 – 2013) for the number of males grouse (or unknown gender if males were not identified) attending leks. UDs and bandwidths were calculated using Geospatial Modelling Environment (Beyer 2012) and the ‘ks’ package (Duong 2012) in Program R. Grid cell size was 30m. The resulting raster was clipped by the SGMA polygon, and values were re-scaled between zero and one by dividing by the maximum pixel value.The non-linear effect of distance to lek on the probability of grouse spatial use was estimated using the inverse of the utilization distribution curves described by Coates et al. (2013), where essentially the highest probability of grouse spatial use occurs near leks and then declines precipitously as a non-linear function. Euclidean distance was first calculated in ArcGIS, reclassified into 30-m distance bins (ranging from 0 – 30,000m), and bins reclassified according to the non-linear curve in Coates et al. (2013). The resulting raster was clipped by the SGMA polygon, and re-scaled between zero and one by dividing by the maximum pixel value.A Spatial Use Index (SUI) was calculated taking the average of the lek utilization distribution and non-linear distance to lek rasters in ArcGIS, and re-scaled between zero and 1 by dividing by the maximum pixel value.The volume of the SUI at cumulative 5% increments (isopleths) was extracted in Geospatial Modelling
1:1,000,000-scale hydrographic areas and flow systems for the Great Basin carbonate and alluvial aquifer system of Nevada, Utah, and parts of adjacent states
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This dataset was created in support of a U.S. Geological Survey (USGS) study focusing on groundwater resources in the Great Basin carbonate and alluvial aquifer system (GBCAAS). The GBCAAS is a complex aquifer system comprised of both unconsolidated and bedrock formations covering an area of approximately 110,000 square miles. The aquifer system is situated in the eastern portion of the Great Basin Province of the western United States. The eastern Great Basin is experiencing rapid population growth and has some of the highest per capita water use in the Nation. These factors, combined with its arid setting, have levied intensive demand upon current groundwater resources and, thus, predictions of future shortages. Because of the large regional extent of the aquifer system, rapid growth in the region, and the reliance upon groundwater for urban populations, agriculture, and native habitats, the GBCAAS was selected by the USGS Water Resources program as part of the National Water Census Initiative to evaluate the nation's groundwater availability. This dataset contains hydrographic area (HA) boundaries and polygons for the GBCAAS study area. The study area consists of 165 HAs based on Great Basin HAs defined by the USGS in 1988 (Harrill and others, 1988; Buto, 2009). The study area is characterized by north-south trending alluvial basins separated by intervening mountain ranges. HA boundaries generally coincide with the topographic highs separating these basins but may also contain arbitrary divisions that have no topographic control. HAs generally consist of thick layers of unconsolidated geologic deposits in the basins and consolidated bedrock in the mountain ranges. The basins are underlain by bedrock at varying depths. Much of the bedrock in the study area consists of permeable carbonate and volcanic rock strata, both of which allow some degree of hydraulic connection between hydrographic areas. The hydrographic area boundaries in this dataset have been assigned a code identifying each boundary as a potential barrier, conduit, or neutral zone to groundwater flow between basins. References cited: Buto, S.G., 2009, Digital representation of 1:1,000,000-scale Hydrographic Areas of the Great Basin: U.S. Geological Survey Digital Data Report 457, 5 p., Harrill, J.R., Gates, J.S., and Thomas, J.M., 1988, Major ground-water flow systems in the Great Basin region of Nevada, Utah, and adjacent states: U.S. Geological Survey Hydrologic Investigations Atlas HA-694-C, 2 sheets, scale 1:1,000,000.
Spring Season Habitat Categories for Greater Sage-grouse in Nevada and northeastern California
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This shapefile represents habitat suitability categories (High, Moderate, Low, and Non-Habitat) derived from a composite, continuous surface of sage-grouse habitat suitability index (HSI) values for Nevada and northeastern California during spring, which is a surrogate for habitat conditions during the sage-grouse breeding and nesting period. Summary of steps to create Habitat Categories: HABITAT SUITABILITY INDEX: The HSI was derived from a generalized linear mixed model (specified by binomial distribution) that contrasted data from multiple environmental factors at used sites (telemetry locations) and available sites (random locations). Predictor variables for the model represented vegetation communities at multiple spatial scales, water resources, habitat configuration, urbanization, roads, elevation, ruggedness, and slope. Vegetation data was derived from various mapping products, which included NV SynthMap (Petersen 2008, SageStitch (Comer et al. 2002, LANDFIRE (Landfire 2010), and the CA Fire and Resource Assessment Program (CFRAP 2006). The analysis was updated to include high resolution percent cover within 30 x 30 m pixels for Sagebrush, non-sagebrush, herbaceous vegetation, and bare ground (C. Homer, unpublished; based on the methods of Homer et al. 2014, Xian et al. 2015 ) and conifer (primarily pinyon-juniper, P. Coates, unpublished). The pool of telemetry data included the same data from 1998 - 2013 used by Coates et al. (2014); additional telemetry location data from field sites in 2014 were added to the dataset. The dataset was then split according calendar date into three seasons (spring, summer, winter). Spring included telemetry locations (n = 14,058) from mid-March to June, and is a surrogate for habitat conditions during the sage-grouse breeding and nesting period. All age and sex classes of marked grouse were used in the analysis. Sufficient data (i.e., a minimum of 100 locations from at least 20 marked Sage-grouse) for modeling existed in 10 subregions for spring and summer, and seven subregions in winter, using all age and sex classes of marked grouse. It is important to note that although this map is composed of HSI values derived from the seasonal data, it does not explicitly represent habitat suitability for reproductive females (i.e., nesting). Insufficient data were available to allow for estimation of this habitat type for all seasons throughout the study area extent. A Resource Selection Function (RSF) was calculated for each subregion and using generalized linear models to derive model-averaged parameter estimates for each covariate across a set of additive models. Subregional RSFs were transformed into Habitat Suitability Indices, and averaged together to produce an overall statewide HSI whereby a relative probability of occurrence was calculated for each raster cell during the spring season. In order to account for discrepancies in HSI values caused by varying ecoregions within Nevada, the HSI was divided into north and south extents using a slightly modified flood region boundary (Mason 1999) that was designed to represent respective mesic and xeric regions of the state. North and south HSI rasters were each relativized according to their maximum value to rescale between zero and one, then mosaicked once more into a state-wide extent. HABITAT CATEGORIZATION: Using the same ecoregion boundaries described above, the habitat classification dataset (an independent data set comprising 10% of the total telemetry location sample) was split into locations falling within respective north and south regions. HSI values from the composite and relativized statewide HSI surface were then extracted to each classification dataset location within the north and south region. The distribution of these values were used to identify class break values corresponding to 0.5 (high), 1.0 (moderate), and 1.5 (low) standard deviations (SD) from the mean HSI. These class breaks were used to classify the HSI surface into