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VirOligo: a database of virus-specific oligonucleotides
VirOligo is a database of virus-specific oligonucleotides. The VirOligo database consists of two tables, Common data and Oligo data. The Oligo data table contains PCR primers and hybridization probes used for detection of viral nucleic acids and the Common data table contains the experimental conditions used in their detection. Each oligonucleotide entry contains links to PubMed, GenBank, NCBI Taxonomy databases and BLAST. As of July 2001, the VirOligo database contains a complete listing of oligonucleotides specific to viral agents associated with bovine respiratory disease that were published in English in peer-reviewed journals. The viruses are bovine herpes virus types 1, 3, 4 and 5, bovine viral diarrhea virus, bovine parainfluenza 3 virus, bovine respiratory syncytial virus, bovine adenovirus, bovine rhinovirus, bovine coronavirus, bovine reovirus, bovine enterovirus and alcelaphine herpesvirus-1. The VirOligo database is being expanded to other viruses and can be accessed through the Internet at http://viroligo.okstate.edu/.
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연관 데이터
Viral Genotyping Tool
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This tool helps identify the genotype of a viral sequence.
Data from: Detection and differentiation of low virulence and virulent Orthoavulavirus javaense using a molecular beacon with RT-LAMP
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,This dataset accompanies the manuscript Detection and differentiation of low virulence and virulent Orthoavulavirus javaense using a molecular beacon with RT-LAMP | Scientific Reports (nature.com) published on 08/05/2024. The Orthoavulavirus javaense also called as Newcastle Disease virus is the causative of Newcastle disease a significant problem for the poultry industry. Virulent strains of this virus can cause extensive mortality and economic loss to the poultry industry. Current diagnostic methods rely on polymerase chain reaction targeting the fusion gene of this virus and this method is not only expensive and time consuming, but is also not field applicable. The dataset reported here and the manuscript published describe an assay that can be applied to field diagnosis of NDV via a colorimetric and fluorometric assay. The MB-RT-LAMP assay enables rapid detection of viruses from field samples without the need for RNA isolation and also enable rapid differentiation of virulent vs low virulence viruses. The data provided here demonstrate the sequence analysis undertaken to develop the MB-RT-LAMP primers and probes, the supporting data show the conditions tested to identify optimal parameters.,
VIDA: a virus database system for the organization of animal virus genome open reading frames
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VIDA is a new virus database that organizes open reading frames (ORFs) from partial and complete genomic sequences from animal viruses. Currently VIDA includes all sequences from GenBank for Herpesviridae, Coronaviridae and Arteriviridae. The ORFs are organized into homologous protein families, which are identified on the basis of sequence similarity relationships. Conserved sequence regions of potential functional importance are identified and can be retrieved as sequence alignments. We use a controlled taxonomical and functional classification for all the proteins and protein families in the database. When available, protein structures that are related to the families have also been included. The database is available for online search and sequence information retrieval at http://www.biochem.ucl.ac.uk/bsm/virus_database/VIDA.html.
질병관리청 장관감염증 병원체 감시결과
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본 자료는 2020년부터 2024년까지 최근 5년간 질병관리청 장관감염병 감시체계를 통해 수집된 검체를 대상으로 한 바이러스별 검출 현황 데이터입니다.- 데이터의 출처 (장관감염병 감시체계)- 포함된 바이러스 종류 (노로바이러스, 로타바이러스, 장내아데노바이러스, 아스트로바이러스, 사포바이러스)- 연령 구분( 0-5세, 6-15세, 16-59세, 60세 이상)-내용 ( 연도별 환자 수 및 검출률 제공)연령별로 구분하여 각 연도별 환자 수 및 총 검사 건수 대비 검출률을 산출하였습니다.엑셀파일로 확인 하시기 바랍니다.
농림축산식품부 농림축산검역본부 동물 질병 정보
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['유전자원은행, 동물질병정보, 동물질병 등 동물질병정보를 나타냅니다. 또한 해당질병이 발생한 원인(바이러스, 세균)에 대해서도 알 수 있는 자료입니다.']
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