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The Role of Appendicularians in Southern Ocean Carbon Flow and Trophodynamics
Data acquisition: Samples were collected using a 1.5 metre diameter Ring net (150 micron metre mesh) with a wide cod-end on the base (volume approximately 40 Litres). Vertical trawls were to 20 m (unless otherwise specified). Deployment speed was determined by wave conditions with hauling speed at slowest possible speed available by the gantry (approximately than 2 meters per second). The net was rinsed with sea water before the cod-end was removed and the contents determined by observing a sub-sample under the light microscope. Appendicualrians were separated and preserved while the remaining contents of the cod-end were sieved through 120 micrometre mesh and preserved to be sorted more accurately on return to the laboratories. The appendicularians were quantified and sorted under light microscopes with additional randomly selected individuals being prepared for Scanning Electron Microscopy (SEM) imaging to enable identification to species level and some Oikopleura gaussica stomach's where dissected for SEM dietary analysis. Data processing: Data are being processed using 'statistica 6' (and possibly PRIMER or PATN) to determine correlations with physical parameters obtained from underway data, the CTD and the microbial biologist. Dataset Format: Database is an excel spreadsheet Parameters: Leg - identification number of southern bound legs Event number - deployment number Station - leg number . sample point number CTD - number of corresponding CTD (conductivity, Temperature Depth sample point) Date - date/month/year Time (UTC) Latitude Longitude NET (mesh (micro meters) type) - Net type and mesh size in micro meters (150) DEPTH (m) - vertical trawl depth APPENDICULARIANS - count of appendicularians from ship and laboratory based sorting Fritiliaria drygalski - count of Fritillaridae's from ship and laboratory based sorting Oiklopleura gaussica - count of Oikopleuridae's from ship and laboratory based sorting Alive - count of live appendicularians from ship based sorting SEM IMAGE - individual appendicularians and/or O. gaussica stomach SEM images have been taken SEM Stub number - stub number that is first two numbers of SEM images SAMPLE TYPE - BARCODE Zooplankton - cod-end contents sieved and preserved Appendicularians - sorted from cod-end Live - live appendicularians (now preserved) Other 1- samples that did not fit in to the above categories or additional samples for station Other 2- additional samples for station that did not fit in to the above categories This work was completed as part of ASAC projects 2655 and 2679 (ASAC_2655, ASAC_2679).
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Southern Ocean Calcareous Zooplankton Response to Ocean Acidification
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Metadata record for data from AAS (ASAC) project 3046. Public The overall objective is to characterise the response of Southern Ocean calcareous zooplankton to ocean acidification resulting from anthropogenic CO2 emissions. Simulated increases in anthropogenic CO2 suggest a reduction in the calcification rates of calcareous organisms. A change in the calcification in the Southern Ocean may cause marine ecosystem shifts and in turn alter the capacity for the ocean to absorb CO2 from the atmosphere. We plan to take advantage of naturally-occurring, persistent, zonal variations in Southern Ocean primary production and biomass to investigate the effects of CO2 addition from anthropogenic sources on Southern Ocean calcareous zooplankton communities. A download file containing an excel spreadsheet of data can be found at the provided URL. Project objectives: The overall objective of this project is to characterise the impacts of recent, primarily anthropogenic, increases in atmospheric CO2 and related changes in the carbonate chemistry on shell formation by calcareous zooplankton in the Australian sector of the Southern Ocean. Calcareous zooplankton (e.g. planktonic foraminifera and pteropods) will be collected using plankton nets at five Southern Ocean localities during high seasonal flux periods. Planktonic foraminiferal and pteropod species and abundances, calcification rates and geochemistry (stable isotope and trace-metal) will be determined on plankton tow samples. Data from recent plankton tow samples will be compared with data deposited historically in the Southern Ocean and recovered from existing deep ocean sediment cores to provides insights about the extent to which modern carbon conditions may have already generated ecological impacts. The project will also provide a baseline of the present-day impact of ocean acidification and can be used to monitor the influence of future anthropogenic CO2 emissions in Southern Ocean ecosystems. Taken from the 2008-2009 Progress Report: Progress against objectives: Because of logistical delays to the Aurora Australis shipping schedule, ship time for this project was deferred to the 2009/2010 season. We have made progress in analysing other materials form previous voyages which will assist in the sampling design for the upcoming season. We are making good progress in planning the upcoming voyage currently scheduled for late 2009. Taken from the 2009-2010 Progress Report: Progress against objectives: Project scientists participated in Voyage 2 of the Aurora Australis, from Hobart to Casey Station in December 2009. Using the Rectangular Midwater Trawl we collected a total of eight plankton samples for examination of calcareous plankton distribution and shell characteristics in the summer Southern Ocean. We were targeting pteropods and planktonic foraminifera, two sets of calcifiers whose calcification response to ocean acidification we had previously reported on in publications in Nature Geoscience, Biogeosciences Discussions, and Deep-Sea Research Part II (in press). Project participants included collaborators from Australian National University and Scottish Natural Heritage, UK. There were low abundance of planktonic calclfiers in this particular seasons and sector, but we consider the initial collection a god start. Samples included approx. 18 pteropods; other samples are still being held by Biosecurity Australia and will be examined as soon as they are released. Other samples have already been sent to researchers at the Australian Institute of Marine Science for genetic (RNA) sequencing. This latter collaboration is a key one which will help answer questions about evolutionary responses to ocean acidification; if there are genotypes which are more or less vulnerable to acidification we may already be seeing selective pressure in the ecosystem and a change in the structure of assemblages as "winners" and "losers" are differentially affected by the impact.
Copepod faecal pellets and carbon flux in the coastal sea-ice zone
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This dataset contains samples collected at O'Gorman Rocks and Ellis Fjord near Davis station from December 1997 to March 1998. Depth-stratified zooplankton samples were obtained for determination of zooplankton abundance and biomass. Water samples were collected for the determination of chlorophyll a concentration, protist identification and abundance, and the concentration of particulate and dissolved organic carbon. Sediment trap material was collected for the analysis of faecal pellets (identification and CHN analyses), protist identification and abundance, and the measurement of particulate organic carbon concentration. Zooplankton grazing experiments were performed in the laboratory at Davis station and zooplankton were also collected for CHN analyses. Data from this project arose from projects ASAC 963 and ASAC 2229.
Trophodynamics of Southern Ocean pteropods on the southern Kerguelen Plateau
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This data features stable carbon and nitrogen isotopes of co-occurring Southern Ocean pteropods in order to estimate and compare their Bayesian isotopic niches. Other data includes station number, latitude and longitude, species names and sample ID. Details for each column are as follows: A: "species" - Species analysed including, "clio" = Clio pyramidata f. sulcata; "clione" = Clione limacina antarctica; "spongio" = Spongiobranchaea australis; "Large-fraction POM" = large-fraction particulate organic matter; "Small-fraction POM" = small-fraction particulate organic matter B: "speciesID" - Sample ID = unique identifier from Central Science Laboratory, University of Tasmania C: "station" = CTD number (KAxis research voyage) D: "date" = Date of sample (RMT-8 net trawl, KAxis research voyage) E: "lat" = Latitude (degS) F: "long" = Longitude (degE) G: "%C" = percent carbon (no unit) H: "%N" = percent nitrogen (no unit) I: "C:N (bulk)" = uncorrected (raw) carbon-to-nitrogen ratio (no unit) J: "delta 13C (bulk)" = uncorrected (raw) stable carbon isotope values (‰) H: "delta 15N (bulk)" = uncorrected (raw) stable nitrogen isotope values (‰) L: "notes" = samples may be duplicated or triplicated M: "atomic C:N" = C:N (bulk) x 14/12 (no unit) N: "atomic L" = 93/(1+ (1/((0.246 x atomic C:N) - 0.775))) O: "L" = 93/(1+(1/((0.246 x C:N (bulk) - 0.775))) P: "delta 13C (Kiljunen)" = delta 13C (bulk) corrected using formula by Kiljunen et al. 2006 Q: "delta 13C (atomic Kiljunen)" = delta 13C (bulk) corrected using formula by Kiljunen et al. 2006 and atomic L value (column N) R: "delta 13C (Post)" = delta 13C (bulk) corrected using formula by Post et al. 2007 S: "delta 13C (Weldrick)" = delta 13C (bulk) corrected using formula by Weldrick et al. 2019 T: "delta 13C (atomic Smyntek)" = delta 13C (bulk) corrected using formula by Smyntek et al. 2007 and atomic L value (column N) U: "delta 13C (Smyntek)" = delta 13C (bulk) corrected using formula by Smyntek et al. 2007 V: "delta 13C (Logan)" = delta 13C (bulk) corrected using formula by Logan et al. 2008 W: "delta 13C (Syvaranta)" = delta 13C (bulk) corrected using formula by Syvaranta and Rautio 2010 The analysis is featured within a recently accepted paper titled "Trophodynamics of Southern Ocean pteropods on the southern Kerguelen Plateau" peer-reviewed for Ecology and Evolution (2019). It is based on samples collected during the KAxis research voyage, 2015/16.
Ctenophores of the Southern Ocean
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This dataset is a document describing the Ctenophores of the Southern Ocean. It lists all the known species and with illustrated diagrams provides a guide to their taxonomic identification. The document is available for download as a pdf from the provided URL.
Iron content of Southern Ocean phytoplankton: implications for carbon transfer to the deep sea
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Metadata record for data from ASAC Project 2297: Iron content of Southern Ocean phytoplankton: implications for carbon transfer to the deep sea. Data on size-fractionated distribution of suspended trace elements (including iron) in marine particles taken from the surface Southern Ocean south of Australia. Data for 4 size-fractions at 4 stations along ~142 degrees E are included. Explanation of codes used in the dataset: The isotope of the element of interest is listed down column A. LR refers to low resolution and MR medium resolution (that is the resolution of the ICPMS analytical instrument). So Mn55(LR) is the manganese isotope 55 ran in low resolution. SFP1_2um_B2_1: SFP=size-fractionated particles 1=station 1 2um=2micron filter size B2=blank 2 1=replicate 1 RSD%=relative standard deviation in % Blank=field blank Blk/sample%=blank-to-sample ratio in % CRMs_261102=certified reference materials (ran on 26 Nov 2002) Scaled up=previous column times multiplication factor (a serial dilution was used) Blk=blank subtracted certified=the value certified by the manufacturer of the reference material SLRS_1in25_1= the CRM 'SLRS', ran with a 1 in 25 dilution factor, replicate 1 DigBlk1_1=digestion blank 1, replicate 1 See the link below for public details on this project.
Spring Phytoplankton Assemblages in the Southern Ocean Between Australia and Antarctica
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This dataset comprises of an excel spreadsheet of data collected on the CLIVAR-SR3 cruise in November to December 2001. The spreadsheet contains plankton and carbon data. From the abstract of the referenced publication: Variations of phytoplankton assemblages were studied in November-December 2001, in surface waters of the Southern Ocean along a transect between the Sub-Antarctic Zone (SAZ) and the Seasonal Ice Zone (SIZ; 46.9-64.9 degrees S; 142-143 degrees E; CLIVAR-SR3 cruise). Two regions had characteristic but different phytoplankton assemblages. Nanoflagellates (less than 20 microns) and pico-plankton (~2 microns) occurred in similar concentrations along the transect, but were dominant in the SAZ, Sub-Antarctic Front (SAF), Polar Front Zone (PFZ) and the Inter-Polar Front Zone (IPFZ), (46.9-56.9 degrees S). Along the entire transect their average cell numbers in the upper 70 m of water column, varied from 300,000 to 1,100,000 cells per litre. Larger cells (greater than 20 microns), diatoms and dinoflagellates, were more abundant in the Antarctic Zone-South (AZ-S) and the SIZ (60.9-64.9 degrees S). In AZ-S and SIZ diatoms ranged between 270,000 and 1,200,000 cells per litre, dinoflagellates from 31,000 to 102,000 cells per litre. A diatom bloom was in progress in the AZ-S showing a peak of 1,800,000 cells per litre. Diatoms were dominated by Pseudo-nitzschia spp., Fragilariopsis spp., and Chaetoceros spp. Pseudo-nitzschia spp. outnumbered other diatoms in the AZ-S. Fragilariopsis spp. were most numerous in the SIZ. Dinoflagellates contained autotrophs (eg Prorocentrum) and heterotrophs (Gyrodinium/Gymnodinium, Protoperidinium). Diatoms and dinoflagellates contributed most to the cellular carbon: 11-25 and 17-124 micrograms of carbon per litre, respectively. Small cells dominated in the northern region characterised by the lowest N-uptake and new production of the transect. Larger diatom cells were prevalent in the southern area with higher values of N-uptake and new production. Diatom and nanoflagellate cellular carbon contents were highly correlated with one another, with primary production, and productivity related parameters. They contributed up to 75% to the total autotrophic C biomass. Diatom carbon content was significantly correlated to nitrate uptake and particle export, but not to ammonium uptake, while flagellate carbon was well correlated to ammonium uptake, but not to export. Diatoms have contributed highly to particle export along the latitudinal transect, while flagellates played a minor role in the export. This work was completed as part of ASAC project 1343 (ASAC_1343). The fields in this dataset are: Station (depth, position, date, comments) Species Cells per millilitre cell carbon - micrograms per litre
The Southern Annular Mode (SAM) influences phytoplankton communities in the seasonal ice zone of the Southern Ocean
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The absolute abundances (cells per ml) of 22 hard-shelled phytoplankon taxa (comprised of species, genera or higher taxonomic groups) estimated from Scanning Electron Microscope survey of 52 samples collected through 11 austral spring-summers (2002/3 to 2012/13) (part of the L' Astrolabe collection) from the seasonal ice zone of the Southern Ocean (between latitude 62 and 64.4 degrees south, and longitude 135.8 and 150 degrees east) also included are environmental covariables for each sample: three constructed SAM indices, SST, Salinity, NOx, PO4, SiO4, and the sampling date, time, and location. Fifty-two surface-water samples were collected from the seasonal ice zone (SIZ) of the Southern Ocean (SO) across 11 consecutive austral spring-summers from 2002/03 to 2012/13. The samples were collected aboard the French re-supply vessel MV L’Astrolabe during resupply voyages between Hobart, Tasmania, and Dumont d’Urville, Antarctica between the 20th October and the 1st March. Most samples were collected from ice-free water, although some were collected south of the receding ice-edge. The sampled area was in the high latitude SO (Figure 1b) in the south-east corner of the Australian Antarctic Basin, spanning 270 km of latitude between 62°S and 64.5°S, and 625km of longitude between 136°E and 148°E. The area lies greater than 100 km north of the Antarctic continental shelf, in waters greater than 3,000 m depth. Samples were obtained from the clean seawater line of the re-supply ship from around 3 m depth. Each sample represented 250 ml of seawater filtered through a 25 mm diameter polycarbonate-membrane filter with 0.8 µm pores (Poretics). The filter was then rinsed with two additions of approximately 2 ml of MilliQ water to remove salt, then air dried and stored in a sealed container containing silica gel desiccant. Samples were prepared for scanning electron microscope (SEM) survey by mounting each filter onto metal stubs and sputter coating with 15 nm gold or platinum. Only organisms possessing hard siliceous or calcareous shells were sufficiently well preserved through the sample preparation technique that they could be identified by SEM, and included diatoms, coccolithophores, silicoflagellates, Pterosperma, parmales, radiolarians, and armoured dinoflagellates. The composition and abundance the phytoplankton community of each sample was determined using a JEOL JSM 840 Field Emission SEM. Cell numbers for each phytoplankton taxon were counted in randomly selected digital images of SEM fields taken at x400 magnification (Figure 2). Each image represented an area of 301 x 227 µm (0.068 mm2) of each sample filter, which was captured at a resolution 8.5 pixels/µm. A minimum of three SEM fields were assessed for each sample, with more fields assessed when cell densities were lower. On average, 387 cells were counted for each sample. Taxa were classified with the aid of Scott and Marchant (2005), Tomas (1997), and expert opinion. Cell counts per image were converted to volume-specific abundances (cells/ml) by dividing by 0.0348 ml of sea-water represented by each image. A total of 19,943 phytoplankton organisms were identified and counted: 18,872 diatoms, 322 Parmales, 173 coccolithophores, 81 silicoflagellates, and 45 Petasaria. A total of 48 phytoplankton taxa were identified, many to species level. Because the diatoms Fragilariopsis curta (Van Heurck) Hustedt and F. cylindrus (Grunow ex Cleve) Helmcke and Krieger could not be reliably discriminated at the microscope resolution employed, they were pooled into a single taxa-group. Other taxa were also grouped, namely Nitzschia acicularis (Kützing) W.Smith with N. decipiens Hustedt to a single group, and discoid centric diatoms of the genera Thalassiosira, Actinocyclus and Porosira to another. Rare species, with maximum relative abundance less than 2%, were removed from the data prior to analysis as they were not considered to be sufficiently abundant to warrant further analysis (Webb
Morphology, Taxonomy and Ecology of Terrestrial Antarctic Ciliates and Testaceans (Protozoa)
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Project 565: The database provides a list of species of ciliates and testate amoebae (Protozoa: Ciliophora; Testacea) recorded in various edaphic habitats, e.g., mineral soils (fellfield), ornithogenic soils, terrestrial mosses, from ice-free coastal areas and inshore islands in the area of Casey Station, Wilkes Land, coastal continental Antarctica. 26 ciliate (9 first records for continental Antarctica, 1 undescribed) and 5 testacean species (3 new records) were found. Sea ice study (Weddell Sea): The ciliate biodivesity was studied in several types of sea ice (mainly young pancake ice) from the Weddell Sea, Antarctica, in the austral autumn 1992 (March-May) during the cruise ANT X/3 of RV Polarstern. 49 ciliate species were predominantly found in sea ice and 6 spp. in the pelagial; 20 of these were new to science. A word document containing a list of species that were recorded as part of the project is available for download from the provided URL. These data have also been incorporated into the biodiversity database.