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Dataset for ORD-033294: Mining a human transcriptome database for chemical modulators of NRF2
Gene Expression Omnibus and ArrayExpress archived study numbers of microarray data used in the study. This dataset is associated with the following publication: Rooney, J., B. Chorley, S. Hiemstra, S. Wink, X. Wang, D. Bell, B. van de Water, and J. Corton. Mining a human transcriptome database for chemical modulators of Nrf2 (PLOS ONE). PLoS ONE. Public Library of Science, San Francisco, CA, USA, 15(9): e0239367, (2020).
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Dataset for ORD-033364: Identification of Novel Activators of the Metal Responsive Transcription Factor (MTF-1) Using a Gene Expression Biomarker in a Microarray Compendium
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The microarray experiments examined in the study. This dataset is associated with the following publication: Jackson, A., J. Liu, B. Vallanat, C. Jones, M. Nelms, G. Patlewicz, and J. Corton. Identification of Novel Activators of the Metal Responsive Transcription Factor (MTF-1) Using a Gene Expression Biomarker in a Microarray Compendium. Metallomics. Royal Society of Chemistry, London, UK, 12(9): 1400-1415, (2020).
Dataset associated with ORD-025118: Using a Gene Expression Biomarker to Identify DNA Damage-Inducing Agents in Microarray Profiles
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Datasets used in ORD-025118: Using a Gene Expression Biomarker to Identify DNA Damage-Inducing Agents in Microarray Profiles. This dataset is associated with the following publication: Corton, C., A. Williams, and C. Yauk. Using a Gene Expression Biomarker to Identify DNA Damage-Inducing Agents in Microarray Profiles. ENVIRONMENTAL AND MOLECULAR MUTAGENESIS. John Wiley & Sons, Inc, Hoboken, NJ, USA, 59(9): 772-784, (2018).
Dataset used in ORD-035008 - A Set of Six Gene Expression Biomarkers and Their Thresholds Identify Rat Liver Tumorigens in Short-Term Assays
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The links provided include the DrugMatrix-Affymetrix study, the TG-GATES study, and the TempO-Seq S1500+ study. This dataset is associated with the following publication: Lewis, R., T. Hill III, and C. Corton. A set of six Gene expression biomarkers and their thresholds identify rat liver tumorigens in short-term assays. TOXICOLOGY. Elsevier Science Ltd, New York, NY, USA, 443: 152547, (2020).
Datasets in Gene Expression Omnibus used in the study ORD-022075: Chemical Activation of the Constitutive Activated Receptor (CAR) Leads to Activation of Oxidant-Induced Nrf2
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Gene Expression Omnibus (GEO) accession numbers of studies used in the analysis. This dataset is associated with the following publication: Rooney, J., K. Oshida, R. Kumar, W. Baldwin, and C. Corton. Chemical Activation of the Constitutive Androstane Receptor Leads to Activation of Oxidant-Induced Nrf2. TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA, 167(1): 172-189, (2019).
Datasets in Gene Expression Omnibus used in the study ORD-022075: Chemical Activation of the Constitutive Activated Receptor (CAR) Leads to Activation of Oxidant-Induced Nrf2
공공데이터포털
Gene Expression Omnibus (GEO) accession numbers of studies used in the analysis. This dataset is associated with the following publication: Rooney, J., K. Oshida, R. Kumar, W. Baldwin, and C. Corton. Chemical Activation of the Constitutive Androstane Receptor Leads to Activation of Oxidant-Induced Nrf2. TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA, 167(1): 172-189, (2019).
Dataset for ORD-040059: Identification of Chemical Modulators of NF-κB Using a Gene Expression Biomarker Approach
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Dataset used in ORD-040059: Identification of Chemical Modulators of NF-κB Using a Gene Expression Biomarker Approach that includes publicaly available microarray datasets. This dataset is associated with the following publication: Korunes, K., J. Liu, R. Huang, M. Xia, K. Houck, and C. Corton. A gene expression biomarker for predictive toxicology to identify chemical modulators of NF-κB. PLOS ONE. Public Library of Science, San Francisco, CA, USA, 17(2): e0261854, (2022).
Dataset for ORD-040059: Identification of Chemical Modulators of NF-κB Using a Gene Expression Biomarker Approach
공공데이터포털
Dataset used in ORD-040059: Identification of Chemical Modulators of NF-κB Using a Gene Expression Biomarker Approach that includes publicaly available microarray datasets. This dataset is associated with the following publication: Korunes, K., J. Liu, R. Huang, M. Xia, K. Houck, and C. Corton. A gene expression biomarker for predictive toxicology to identify chemical modulators of NF-κB. PLOS ONE. Public Library of Science, San Francisco, CA, USA, 17(2): e0261854, (2022).
Datasets in Gene Expression Omnibus used in the study ORD-019001: Compensatory changes in CYP expression in three different toxicology mouse models: CAR-null, Cyp3a-null, and Cyp2b9/10/13-null mice.
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Accession numbers of microarray data sets used in the analysis. This dataset is associated with the following publication: Kumar, R., L. Mota, E. Litoff, J. Rooney, T. Boswell, E. Courter, C. Henderson, J. Hernandez, C. Corton, D. Moore, and W. Baldwin. Compensatory changes in CYP expression in three different toxicology mouse models: CAR-null, Cyp3a-null, and Cyp2b9/10/13-null mice. PLoS ONE. Public Library of Science, San Francisco, CA, USA, 12(3): 1-24, (2017).
Dataset for ORD-033344: A Set of Six Gene Expression Biomarkers Identify Rat Liver Tumorigens in Short-Term Assays
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Microarray experiments used in the study. This dataset is associated with the following publication: Corton, J., T. Hill, J. Sutherland, J. Stevens, and J. Rooney. A Set of Six Gene Expression Biomarkers Identify Rat Liver Tumorigens in Short-Term Assays. TOXICOLOGICAL SCIENCES. Society of Toxicology, RESTON, VA, 177(1): 11-26, (2020).
Datasets used in ORD-023401: Activation of Nrf2 in the Liver is Associated with Suppression of the Growth Hormone-Regulated STAT5b Transcription Factor
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Datasets used in ORD-023401: Activation of Nrf2 in the Liver is Associated with Suppression of the Growth Hormone-Regulated STAT5b Transcription Factor. This dataset is associated with the following publication: Rooney, J., K. Oshida, N. Vasani, B. Vallanat, N. Ryan, B. Chorley, X. Wang, D. Bell, K. Wu, L. Aleksunes, C. Klaassen, T. Kensler, and C. Corton. Activation of Nrf2 in the Liver is Associated with Suppression of the Growth Hormone-Regulated STAT5b Transcription Factor. PLoS ONE. Public Library of Science, San Francisco, CA, USA, 13(8): 1-30, (2018).