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미국
Genome analysis of the ubiquitous boxwood pathogen Pseudonectria foliicola: A small fungal genome with an increased cohort of genes associated with loss of virulence
,Boxwood plants are affected by many different diseases caused by fungi. Some boxwood diseases are deadly and quickly kill the infected plants, but with others, the plant can survive and even thrive when infected. The fungus that causes volutella blight is the most common of these weak boxwood pathogens. Even the healthiest boxwood plants are infected by the volutella fungus, and often there are no signs that the plants are hurt by the infection. In order to understand why the volutella blight fungus is such a weak pathogen and to understand the genetic mechanisms it uses to interact with boxwood, the complete genome of the volutella fungus was sequenced and characterized. These datasets are generated from the genome sequence of Pseudonectria foliicola, strain ATCC13545, the fungus responsible for volutella disease of boxwood. Datasets include the nuclear genome and mitochondrial genome assemblies (sequenced using Illumina technology), the predicted gene model dataset generated using MAKER, the multiple sequence alignment of single-copy orthologs used for phylogenetic analysis, CMAP files generated from SimpleSynteny analysis of mitogenomes, and high quality photographic images.,,
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Genome datasets for Calonectria henricotiae and C. pseudonaviculata causing boxwood blight disease and related fungal species
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,Boxwood blight disease, caused by the fungi Calonectria henricotiae and C. pseudonaviculata, is an emergent threat to natural and managed landscapes worldwide.,Boxwood blight emerged for the first time in the U.K. during the 1990s, then spread rapidly throughout Europe. By 2011, the fungus that causes the disease, Calonectria pseudonaviculata, was found in the U.S., threatening an industry valued at $103 million annually and countless mature landscapes, some dating back to early Colonial times. Since the first U.S. outbreaks, boxwood blight has been identified from a total of 19 states that together comprise 62% of the total U.S. boxwood production. A second pathogen, C. henricotiae, was recently described from five European countries. Infection can be latent, and the pathogen may sequester in less susceptible boxwood cultivars. Because there are no curative treatments—fungicides are at best suppressive of symptoms—infected plants are rendered unfit for sale. If infected plants are not destroyed, they provide a long-lived source of inoculum that spreads the pathogen by spores or resistant survival structures in soil, air, or water. Our goal is to provide knowledge and tools needed to reduce the impact of boxwood blight on the green industry.,This database includes genome datasets from Calonectria pathogens of boxwood and related species.,,
Protein predictions for Calonectria pseudonaviculata CBS 139707 (aka cpsCT01)
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,Boxwood blight disease, caused by the fungi Calonectria henricotiae and C. pseudonaviculata, is an emergent threat to natural and managed landscapes worldwide. This dataset contains protein predictions and identifications generated from Calonectria pseudonaviculata CBS 139707 (aka cpsCT01) genome dataset https://doi.org/10.15482/USDA.ADC/1410184.,,
Pseudogymnoascus destructans detections by US county 2007-2022
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This data documents the results of sampling for the white-nose syndrome fungus, Pseudogymnoascus destructans (Pd) at the USGS National Wildlife Health Center between 2007-2022. Data are reported on the county level. Locations are accurate to county only. We used data collected at winter locations only (hibernaculum) for this data set.
Pseudogymnoascus destructans detections by US county (2008-2012)
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This data represents the number of positive and negative Pd (Pseudogymnoascus destructans) detections by county over the sampling period 2008-2012. Pd is the fungus that is the causative agent of white-nose syndrome.
Pseudogymnoascus destructans detections by US county (2008-2012)
공공데이터포털
This data represents the number of positive and negative Pd (Pseudogymnoascus destructans) detections by county over the sampling period 2008-2012. Pd is the fungus that is the causative agent of white-nose syndrome.
Pseudogymnoascus destructans detections by US county 2013-2020
공공데이터포털
This data documents the results of sampling for the white-nose syndrome fungus, Pseudogymnoascus destructans (Pd) at the USGS National Wildlife Health Center between 2013-2020. Data are reported on the county level. Locations are accurate to county only. We used data collected at winter locations only (hibernaculum) for this data set.
Pseudogymnoascus destructans detections by US county 2013-2020
공공데이터포털
This data documents the results of sampling for the white-nose syndrome fungus, Pseudogymnoascus destructans (Pd) at the USGS National Wildlife Health Center between 2013-2020. Data are reported on the county level. Locations are accurate to county only. We used data collected at winter locations only (hibernaculum) for this data set.
Determinants of Pseudogymnoascus destructans within bat hibernacula: data
공공데이터포털
This dataset includes data used to summarize trends and identify best-fit models to explain patterns in presence-absence and abundance of Pseudogymnoascus destructans (Pd) in environmental substrates and on bats within six bat hibernacula at different stages of white-nose syndrome (WNS). Data relating to environmental substrates include: dates and relative spatial locations of samples collected within study hibernacula, presence and quantity of Pd in samples based on qPCR analysis, and daily temperature parameters at each sample location on the days samples were collected. Data relating to bats include: dates and relative spatial locations of hibernating bats that were sampled, species, sex, weight(g), forearm length(mm), body mass index (weight/forearm), proportion of the wing with visible fungus or fluorescence characteristic of WNS under hand-held UVA light and presence and quantity of Pd in wing-skin swab samples based on qPCR analysis. Measures of time since first detection of WNS at each study hibernaculum are also included in the dataset.
Determinants of Pseudogymnoascus destructans within bat hibernacula: data
공공데이터포털
This dataset includes data used to summarize trends and identify best-fit models to explain patterns in presence-absence and abundance of Pseudogymnoascus destructans (Pd) in environmental substrates and on bats within six bat hibernacula at different stages of white-nose syndrome (WNS). Data relating to environmental substrates include: dates and relative spatial locations of samples collected within study hibernacula, presence and quantity of Pd in samples based on qPCR analysis, and daily temperature parameters at each sample location on the days samples were collected. Data relating to bats include: dates and relative spatial locations of hibernating bats that were sampled, species, sex, weight(g), forearm length(mm), body mass index (weight/forearm), proportion of the wing with visible fungus or fluorescence characteristic of WNS under hand-held UVA light and presence and quantity of Pd in wing-skin swab samples based on qPCR analysis. Measures of time since first detection of WNS at each study hibernaculum are also included in the dataset.
Data from: Genome resources for seven fungal isolates that cause turfgrass dollar spot disease, including Clarireedia jacksonii and C. monteithiana
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,Ascomycete fungi in the genus Clarireedia are responsible for dollar spot, one of the most destructive and costly diseases affecting turfgrasses worldwide. Almost all grasses grown as turf are susceptible to dollar spot, including many high value grass species commonly used for golf courses. This Ag Data Commons dataset provides the genome sequences for seven isolates of Clarireedia fungi that cause dollar spot disease, including sequences of the two most widespread species, C. jacksonii and C. monteithiana. These data are freely available for research purposes.,,