This dataset contains isotope results of stable isotope (δ13C and δ15N) and radicoarbon (F14C) analyses of muscle tissue from fish collected in the nearshore Beaufort Sea, Alaska in summers 2017-2019.

This dataset contains isotope results of stable isotope (δ13C and δ15N) and radicoarbon (F14C) analyses of muscle tissue from fish collected in the nearshore Beaufort Sea, Alaska in summers 2017-2019.

This project seeks to develop and apply an assessment of shellfish growing area (SGA) vulnerability to closures caused by watershed- and marine-derived pathogens. Using empirical data and quantitative models, we will examine the impacts of alternative watershed management strategies, nearshore protection, and climate on the vulnerability of three SGA. Outputs include the following: 1) Maps of the spatial distribution of terrestrial and marine-derived sources of nutrients and pathogens. 2) Validated model estimates of transport of nutrients and pathogens to SGA under future climate and restoration strategies. 3) Assessments of the fate of nutrients and pathogens in terms of changes in ecosystem service values provided by SGA--filtration, food web support, and socio-economic impacts due to harvest closures. Outcomes include improvements in the ability of shellfish growers and managers to classify vulnerability of SGA according to risk of future closures, and to prioritize strategies for improving delivery of shellfish-related ecosystem services and values. Stable isotopes of Carbon and Nitrogen for Pacific oysters and potential diet sources from marine and freshwater sources in the Samish, Hamma Hamma and Dosewallips growing areas. This dataset also includes water quality parameters from CTD casts at high tide in the oyster beds.

A study to evaluate the role of changing ocean conditions on growth and survival of juvenile salmon from the Columbia River basin as they enter the Columbia River plume and Pacific Northwest coastal habitats. Adult returns vary dramatically (over 10 fold) as a result of changing (good or bad) ocean conditions juveniles experience. Evaluating the benefit of restoration efforts in the Columbia River to restore endangered salmon populations needs to consider ocean conditions as a contributing factor to recovery. This is a large collaborative project with contributions from NWFSC, Oregon State University, and Oregon Health and Science University. The work focuses on three objectives: 1) Determining the distribution, growth, and condition of juvenile Columbia River Chinook and coho salmon in the plume and their ocean environments with associated physical and biological features, and effects on salmon survival via regular spring and summer surveys. 2) Using additional focused surveys to obtain critical pieces of information on predator impacts, specific food resources, biological condition, and means by which juvenile salmon exit the Columbia River estuary. 3) Synthesizing the early ocean ecology of juvenile Columbia River Chinook and coho salmon, test mechanisms that control salmonid growth and survival, and produce ecological indices that forecast salmonid survival. This project provides critical information on marine survival to the Columbia River salmonid management community (hydrosystem, harvest, hatchery, and habitat management) provides environmental indicators useful for forecasting salmon returns, and provides a greater understanding of ecological controls on salmon populations. This is a long-term monitoring and research project initiated in 1998. Species, abundance, and distribution of birds during salmon surveys.

A 2007 pilot study was initiated by the University of Alaska – Southeast in which baseline levels of contaminants, including persistent organic pollutants (POPs) and total mercury, were determined in whole bodies of juvenile coho salmon collected in streams in and near national park units in the Southeast Alaska Inventory and Monitoring Network. Although the concentrations of POPs determined in the juvenile coho were relatively low (< 10 ng/g, wet weight), the preliminary findings of this study indicate that, in the Glacier National Park region, salmon from streams with higher density of spawners had increased levels of certain banned chlorinated pesticides (i.e., alpha-chlordane, o,p’-DDT, p,p’-DDD) compared to salmon collected in other streams with lower salmon spawning density. A follow up study will be initiated in spring/summer 2015 to determine concentrations of POPs in resident salmonids, as well as benthic macroinvertebrates collected from five streams that have fish barriers near or adjacent to Glacier National Park. Comparisons in contaminant concentrations and patterns will be made for fish collected below and above the barrier in each stream to help determine if certain classes of POPs are being transported by the spawners. As part of this study, the NWFSC will analyze whole bodies/muscle of salmonids and benthic macroinvertebrate samples POPs using gas chromatography / mass spectrometry (GC/MS). Percent lipid content of samples (with adequate sample mass) will also be determined. These data will be included in a report to the NIH-sponsored IDeA Network of Biomedical Research Excellence. Determining levels of persistent organic pollutants in salmonids and macroinvertebrates.

This work uses white muscle tissues collected from sixgill and sevengill sharks to characterize the diet of each species. Tissues from prey species have also been prepared in order to initialize the models. We used mixing models to determine the probabilities of each prey species being in the diet of these top predators. These data will be used to predict which prey groups are impacted by these species, and then used in conjunction with patterns of daily, seasonal, and annual movement patterns to examine the variation in predatory impact across space and time among the various prey groups. Shark tissue stable isotope signatures from Northeast Pacific coastal habitats.

Long-running science support for the agency (Office of Protected Resources, others) related to the use of modern pesticides throughout the United States as a limiting factor for endangered species conservation and recovery. This work is currently supporting several national ESA Biological Opinions, and is under review by the National Academy of Sciences. The NAS panel recommendations are expected in the summer of 2013, and these will guide additional research in FY14 and beyond. Analyses of water and tissue samples for pesticides.

The objective of this project is to develop a simple approach for estimating the marine survival and causes of trends in survival. Data is a summary of ecosystem indicators of coho salmon marine survival.

The objective of this study is to quantify population, community, and ecosystem level changes as a result of salmon recolonization of the Cedar River, WA above Landsburg Dam. The dam was installed in 1901, blocking the upstream migration of adult salmon and steelhead from about 43 km of river habitat. A fish ladder was installed in 2003 to allow adult salmon passage. We collected baseline data on water chemistry, habitat, isotopes (periphyton, invertebrates, fish, riparian trees) and resident trout and sculpin populations in 2000-2002. These studies have been ongoing since 2000. A mark-recapture study in Rock Creek, the largest tributary available to salmon, was started in 2004 to quantify growth, movement, and survival of juvenile coho and resident trout. C and N isotope levels in plants, insects and fish in the Cedar River.

This dataset includes lab data for fish, fish diets, and stable isotopes for fish tissue, vegetation, and invertebrates collected during daylight hours in the Rodeo Lagoon and Lake in Golden Gate National Recreation Area at the Pacific Coast, USA during 2016 and 2017. This data release includes all animal taxa, and isotope values included in the analysis.