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Nuclear microsatellite genotypes of six populations of yellow rail (Coturnicops noveboracensis) sampled 2005-2008
These data reflect nuclear microsatellite genotypes for specimens of Yellow Rails sampled in 2005-2008. Data from 6 populations are included.
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Nuclear microsatellite genotypes of six populations of yellow rail (Coturnicops noveboracensis) sampled 2005-2008
공공데이터포털
These data reflect nuclear microsatellite genotypes for specimens of Yellow Rails sampled in 2005-2008. Data from 6 populations are included.
Microsatellite genotypes for Light-footed Ridgway's rail (Rallus obsoletus levipes) sampled in southern California
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The dataset includes the coordinates, collection year, age, band number, studbook number, and 54 microsatellite genetic markers for 186 individual light-footed Ridgway's rails, Rallus obsoletus levipes.
Microsatellite genotypes for Light-footed Ridgway's rail (Rallus obsoletus levipes) sampled in southern California
공공데이터포털
The dataset includes the coordinates, collection year, age, band number, studbook number, and 54 microsatellite genetic markers for 186 individual light-footed Ridgway's rails, Rallus obsoletus levipes.
Genotypes and cluster definitions for a range-wide greater sage-grouse dataset collected 2005-2017
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Monitoring change in genetic diversity in wildlife populations across multiple scales could facilitate prioritization of conservation efforts. We used microsatellite genotypes from 7,080 previously collected genetic samples from across the greater sage-grouse (Centrocercus urophasianus) range to develop a modelling framework for estimating genetic diversity within a recently developed hierarchically nested monitoring framework (clusters). The majority of these genetic samples (n=6560) were used in previous research (Oyler-McCance et al. 2014; Cross et. al 2018; Row et. al. 2018). Genetic diversity values associated with clusters across multiple scales could facilitate the identification of areas with low genetic diversity and inform the potential management or conservation priority and response. We also report the data used to define genetic diversity thresholds of conservation concern and a full reporting of the genetic diversity estimates associated with the evaluated clusters.
Genotypes and cluster definitions for a range-wide greater sage-grouse dataset collected 2005-2017
공공데이터포털
Monitoring change in genetic diversity in wildlife populations across multiple scales could facilitate prioritization of conservation efforts. We used microsatellite genotypes from 7,080 previously collected genetic samples from across the greater sage-grouse (Centrocercus urophasianus) range to develop a modelling framework for estimating genetic diversity within a recently developed hierarchically nested monitoring framework (clusters). The majority of these genetic samples (n=6560) were used in previous research (Oyler-McCance et al. 2014; Cross et. al 2018; Row et. al. 2018). Genetic diversity values associated with clusters across multiple scales could facilitate the identification of areas with low genetic diversity and inform the potential management or conservation priority and response. We also report the data used to define genetic diversity thresholds of conservation concern and a full reporting of the genetic diversity estimates associated with the evaluated clusters.
Scoter (Melanitta sp.) ddRAD SNP and Microsatellite Genetic Data, North America and Europe, 1977-2012
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This data set contains sampling information, allele sizes of 11 microsatellite loci, and Genbank accession numbers of ddRAD seq results for scoters (Melanitta sp.). Microsatellite data is provided for three North American species of scoter (black scoter, M. americana n = 61; white-winged scoter, M. deglandi, n = 208; surf scoter, M. perspicillata, n = 145) and their European congeners (common scoter, M. nigra, n = 19; velvet scoter, M. fusca, n = 20). Individuals with ddRAD results include 27 black scoters, 4 common scoters, 32 surf scoters, 28 white-winged scoters, and 4 velvet scoters.
Genotype Data for Eastern Massasauga Rattlesnakes (Sistrurus catenatus) from Bois Blanc Island, Michigan at 15 Microsatellite DNA Loci
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We investigated fine-scale genetic patterns of the federally threatened Eastern Massasauga Rattlesnake (Sistrurus catenatus) on a relatively undisturbed island in northern Michigan, USA. This species often persists in habitat islands throughout much of its distribution due to extensive habitat loss and distance-limited dispersal. These data are from 102 individual Eastern Massasauga Rattlesnakes sampled at Bois Blanc Island, Michigan and genotyped at 15 microsatellite loci. Samples were collected as part of a study to examine functional connectivity for the Eastern Massasauga. We found that the entire island population exhibited weak genetic structuring with spatially segregated variation in effective migration and genetic diversity.
Genotype Data for Eastern Massasauga Rattlesnakes (Sistrurus catenatus) from Bois Blanc Island, Michigan at 15 Microsatellite DNA Loci
공공데이터포털
We investigated fine-scale genetic patterns of the federally threatened Eastern Massasauga Rattlesnake (Sistrurus catenatus) on a relatively undisturbed island in northern Michigan, USA. This species often persists in habitat islands throughout much of its distribution due to extensive habitat loss and distance-limited dispersal. These data are from 102 individual Eastern Massasauga Rattlesnakes sampled at Bois Blanc Island, Michigan and genotyped at 15 microsatellite loci. Samples were collected as part of a study to examine functional connectivity for the Eastern Massasauga. We found that the entire island population exhibited weak genetic structuring with spatially segregated variation in effective migration and genetic diversity.
Peregrine Falcon (Falco peregrinus) mtDNA and Microsatellite Genetic Data, Alaska, Canada and Russia, 1880-2012
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This data set provides sample information, microsatellite genotype, and NCBI accession numbers for mitochondrial DNA sequences of peregrine falcons (Falco peregrinus) from North America and Russia.
Sample collection information, single nucleotide polymorphism, and microsatellite data for white-tailed ptarmigan across the species range generated in the Molecular Ecology Lab during 2016
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This data release comprises a dataset that contains sample collection information and microsatellite genotypes, and another dataset that contains single nucleotide polymorphism (SNP) genotypes with sample collection information for populations of white-tailed ptarmigan across the species' range. There is also an additional file (accession numbers.xlsx) linking samples to accession numbers in Genbank. This data was collected in order to address the following: The delineation of intraspecific units that are evolutionarily and demographically distinct is an important step in the development of species-specific management plans. Neutral genetic variation has served as the primary data source for delineating units for conservation, but with recent advances in genomic technology, we now have an unprecedented ability to utilize information about neutral and adaptive variation across the entire genome. Here, we use traditional genetic markers (microsatellites) and a newer reduced-representation genomic approach (single nucleotide polymorphisms) to delineate distinct groups of white-tailed ptarmigan (Lagopus leucura), an alpine-obligate species that is distributed in naturally fragmented habitats from Alaska to New Mexico.