1. Accession numbers of raw RNA sequences, generated using Illumina sequencer, 2. water parameters, and 3. derived data worksheet from the raw RNA sequences. This dataset is associated with the following publication: Wang, K., X. Mou, H. Cao, I. Struewing, H. Allen, and J. Lu. Co-occurring microorganisms regulate the succession of cyanobacterial harmful algal blooms. ENVIRONMENTAL POLLUTION. Elsevier Science Ltd, New York, NY, USA, 288: 117682, (2021).

Sequence data are used for cyanobacterial community and toxic species analysis. This dataset is associated with the following publication: Linz, D., N. Sienkiewicz, I. Struewing, E.A. Stelzer, J.L. Graham, and J. Lu. Metagenomic mapping of cyanobacteria and potential cyanotoxin producing taxa in large rivers of the United States. Scientific Reports. Nature Publishing Group, London, UK, 13: 2806, (2023).

Sequence data are used for cyanobacterial community and toxic species analysis. This dataset is associated with the following publication: Linz, D., N. Sienkiewicz, I. Struewing, E.A. Stelzer, J.L. Graham, and J. Lu. Metagenomic mapping of cyanobacteria and potential cyanotoxin producing taxa in large rivers of the United States. Scientific Reports. Nature Publishing Group, London, UK, 13: 2806, (2023).

Data used to generate Figures 2, 3, and 4 as we ll as Table 3. This dataset is associated with the following publication: Banerji, A., M. Bagley, J. Shoemaker, D. Tettenhorst, C. Nietch, J. Allen, and J. Santodomingo. Evaluating putative ecological drivers of microcystin spatiotemporal dynamics using metabarcoding and environmental data. Harmful Algae. Elsevier B.V., Amsterdam, NETHERLANDS, 86: 84-95, (2019).

The data contained in this worksheets provide sequences submitted for public access, analysis for RNA sequences generated in this study. The data and analysis are for a manuscript "The trait repertoire enabling cyanobacterial blooms assessed through comparative genomic complexity ". This dataset is associated with the following publication: Cao, H., Y. Shimura, M.M. Steffen, Z. Yang, J. Lu, A. Joel, L. Jenkins, M. Kawachi, Y. Yin, and F. Garcia-Pichel. The Trait Repertoire Enabling Cyanobacteria to Bloom Assessed through Comparative Genomic Complexity and Metatranscriptomics. mBio. American Society for Microbiology, Washington, DC, USA, 11(3): e01155-20, (2020).

(1) qPCR and RT-qPCR for cyanotoxin producing genes, and (2) some water quality parameters. This dataset is associated with the following publication: Duan, X., C. Zhang, I. Struewing, X. Li, H. Allen, and J. Lu. Cyanotoxin-encoding genes as powerful predictors of cyanotoxin production during harmful cyanobacterial blooms in an inland freshwater lake: Evaluating a novel early-warning system. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 830: 154568, (2022).

The dataset contains the raw data used for the correlation analyses. This dataset is associated with the following publications: Schaeffer, B., J. SantoDomingo, and B. Kreakie. SSWR 4.3 Tools for HABs Risk Characterization and Assessment FY20 Report. U.S. Environmental Protection Agency, Washington, DC, USA. Chaffin, J., J. Bratton, E. Verhamme, H. Bair, A. Beecher, C. Binding, J. Birbeck, T. Bridgeman, X. Chang, J. Crossman, W. Currie, T. Davis, G. Dick, K. Drouillard, R. Errera, T. Frenken, H. MacIsaac, A. McClure, R.M. McKay, L. Reitz, J. SantoDomingo, K. Stanislaawczyk, R. Stumpf, Z. Swan, B. Synder, J. Westrick, P. Xue, C. Yancey, A. Zastepa, and X. Zhou. The Lake Erie HABs Grab: A binational collaboration to characterize the western basin cyanobacterial harmful algal blooms at an unprecedented high-resolution spatial scale. Harmful Algae. Elsevier B.V., Amsterdam, NETHERLANDS, 108: 102080, (2021).

The dataset contains the raw data used for the correlation analyses. This dataset is associated with the following publications: Schaeffer, B., J. SantoDomingo, and B. Kreakie. SSWR 4.3 Tools for HABs Risk Characterization and Assessment FY20 Report. U.S. Environmental Protection Agency, Washington, DC, USA. Chaffin, J., J. Bratton, E. Verhamme, H. Bair, A. Beecher, C. Binding, J. Birbeck, T. Bridgeman, X. Chang, J. Crossman, W. Currie, T. Davis, G. Dick, K. Drouillard, R. Errera, T. Frenken, H. MacIsaac, A. McClure, R.M. McKay, L. Reitz, J. SantoDomingo, K. Stanislaawczyk, R. Stumpf, Z. Swan, B. Synder, J. Westrick, P. Xue, C. Yancey, A. Zastepa, and X. Zhou. The Lake Erie HABs Grab: A binational collaboration to characterize the western basin cyanobacterial harmful algal blooms at an unprecedented high-resolution spatial scale. Harmful Algae. Elsevier B.V., Amsterdam, NETHERLANDS, 108: 102080, (2021).

Publicly available weblinks used to develop research project. This dataset is associated with the following publication: Hall, E., R. Hall, J. Aron, S. Swanson, M. Philbin, R. Schaefer, T. Jones-Lepp, D. Heggem, J. Lin, E. Wilson, and H. Kahan. An Ecological Function Approach to Managing Harmful Cyanobacteria in Three Oregon Lakes: Beyond Water Quality Advisories and Total Maximum Daily Loads (TMDLs). WATER. MDPI AG, Basel, SWITZERLAND, 11(6): 1125, (2019).

The data include sequences, qPCR, RT-qPCR, water nutrients and cyanotoxins.