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Using the otolith sulcus to aid in prey identification and improve estimates of prey size in diet studies of a piscivorous predator
Diet studies are fundamental for understanding trophic connections in marine ecosystems. In the southeastern US, the common bottlenose dolphin Tursiops truncatus is the predominant marine mammal in coastal waters, but its role as a top predator has received little attention. Diet studies of piscivorous predators, like bottlenose dolphins, start with assessing prey otoliths recovered from stomachs or feces, but digestive erosion hampers species identification and underestimates fish weight (FW). To compensate, FW is often estimated from the least affected otoliths and scaled to other otoliths, which also introduces bias. The ulcus, an otolith surface feature, has a species-specific shape of its ostium and caudal extents, which is within the otolith edge for some species. We explored whether the sulcus could improve species identification and estimation of prey size using a case study of four sciaenid species targeted by fisheries and bottlenose dolphins in North Carolina. Methods were assessed first on otoliths from a reference collection (n=421) and applied to prey otoliths (n=5308) recovered from 20 stomachs of dead stranded dolphins. We demonstrated in reference collection otoliths that cauda to sulcus length (CL:SL) could discriminate between spotted seatrout (Cynoscion nebulosus) and weakfish (Cynoscion regalis) (classification accuracy=0.98). This method confirmed for the first time predation of spotted seatrout by bottlenose dolphins in North Carolina. Using predictive models developed from reference collection otoliths, we provided evidence that digestion affects otolith length more than sulcus or cauda length, making the latter better predictors. Lastly, we explored scenarios of calculating total consumed biomass across degrees of digestion. A suggested approach was for the least digested otoliths to be scaled to other otoliths iteratively from within the same stomach, month, or season as samples allow. Using the otolith sulcus helped overcome challenges of species identification and fish-size estimation, indicating their potential use in other diet studies.
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Stomach content analysis of Atlantic sharpnose shark in the Atlantic Ocean from 2001-08-06 to 2005-09-24 (NCEI Accession 0164343)
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This data contains morphology measurements of the Atlantic Sharpnose shark and stomach content analysis.
Stomach content analysis of the Atlantic Sharpnose Shark from the Northeast Gulf of Mexico from 2000 to 2003 (NCEI Accession 0164788)
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Atlantic sharpnose shark Rhizoprionodon terraenovae diet is described from Crooked Island Sound, an embayment of the northeast Gulf of Mexico. Diet was assessed by life-stage and quantified using six indices: percent by number, percent by weight, frequency of occurrence, the index of relative importance (IRI), IRI expressed on a percent basis (IRI), and IRI based on prey category (IRIPC). Young-of-the-year sharks (n56) fed on a mix of teleosts (mostly clupeids, 44.6 IRIPC) and invertebrates (combined, 25.1 IRIPC), juveniles (n185) on sciaenids (40.7 IRIPC) and clupeids (37.8 IRIPC), and adults (n105) on sciaenids (71.4 IRIPC). Differences in diet by site and ontogeny were tested by comparing diet from Crooked Island Sound with published information from St. Vincent Island in Apalachicola Bay, an adjacent estuary. Stomach contents were also used to expand on published prey size-predator size information.
Stomach content analysis of the Atlantic Sharpnose Shark from the Northeast Gulf of Mexico from 2000 to 2003 (NCEI Accession 0164788)
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This Archival Information Package (AIP) contains basic biological information of Atlantic sharpnose shark and specific (by stomach and prey item) diet information for the Atlantic sharpnose shark. Data were collected by the NMFS Southeast Fisheries Science Center; Panama City, FL Laboratory in the Northeast Gulf of Mexico from 2000 to 2003. Data are in comma separated value (CSV) format and include sex, maturity, number of prey items
Marine Mammal Food Habits Reference Collection, 1995-2018
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The Marine Mammal Laboratory (MML) Food Habits Reference Collection, containing over 1000 specimens of cephalopod beaks and fish bones and otoliths, is used to identify undigested prey remains found in scats or stomachs of stranded or incidentally taken pinnipeds and cetaceans. Marine mammal food habits data are used in conjunction with satellite telemetry and dive records to better understand foraging behavior and prey selection. This information is critical to understanding how commercial fisheries and changing environmental conditions impact these animals. The Food Habits Collection includes fish and cephalopod species that are commonly consumed by pinnipeds along the Pacific Northwest coast and in Alaska, but we are in the process of adding other potential prey species and specimens to fill unrepresented size ranges. We are very appreciative of NMFS/AFSC/RACE fisheries biologists, the Alaska Department of Fish and Game and the University of Washington for their ongoing donations to our collection. With the help and cooperation of researchers such as these, our collection continues to grow in size and usefulness. The Marine Mammal Food Habits Reference Collection is an important research tool within NMML, and is also used several times a year by graduate students and researchers from universities, government agencies and private institutions. These collections have contributed to food habits research on Magister armhook squid, Northern fulmar, Newells shearwater, Hawaiian petrel, river otters and marine mammals. The collections are also used by archeologists to identify fish and mammal bones found in Native American middens from Alaska to Mexico. The database is comprised of a table detailing specimens and associated data and measurements for fish and cephalopod soft tissue and hard parts contained within the reference collection.
ATSH ATL DIET (stomach contents of Atlantic sharpnose shark on east coast of FL (NCEI Accession 0164343)
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A reassessment of the diet of the Atlantic sharpnose shark Rhizoprionodon terraenovae was conducted to provide an update on their trophic level (n390). Rhizoprionodon terraenovae primarily consume teleost fish however, loggerhead sea turtles Caretta caretta were also found in the diet for the first reported time. Analysis suggests that calculated trophic level may significantly depend on geographic area, thus adding a new factor to fishery management decisions.
A Comparison of the foraging ecology and bioenergetics of the early life-stages of two sympatric hammerhead sharks from 1998-07-12 to 2005-07-27 (NCEI Accession 0163192)
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This Archival Information Package (AIP) contains basic biological information on bonnethead and scalloped hammerhead sharks with specific (by stomach and prey item) diet information for these two species. Data were collected by the NMFS Southeast Fisheries Science Center; Panama City, FL Laboratory in the Northeast Gulf of Mexico and the Atlantic Ocean off the coast of Florida from 1998 to 2005. Data are in comma separated value (CSV) format and include length, sex, and number of prey items.
Stomach content analysis of the blacktip shark from the coastal waters of Florida from 2008 to 2010 (NCEI Accession 0166766)
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This Archive Information Package (AIP) contains basic biological information and specific (by stomach and prey item) diet information for blacktip sharks. Data were collected by the NMFS Southeast Fisheries Science Center; Panama City, FL Laboratory, through the observer programs, and other fishery independent surveys in the coastal waters of Florida. Data are in comma separated value (CSV) format and include length, sex, number of prey items, and stomach content analysis. Stomach contents and catch data of early life stages of blacktip sharks (Carcharhinus limbatus) were examined to test for overlap in resource use.
Predator Gut Isotopes - Characterizing ecosystem role of sharks
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This work uses white muscle tissues collected from sixgill and sevengill sharks to characterize the diet of each species. Tissues from prey species have also been prepared in order to initialize the models. We used mixing models to determine the probabilities of each prey species being in the diet of these top predators. These data will be used to predict which prey groups are impacted by these species, and then used in conjunction with patterns of daily, seasonal, and annual movement patterns to examine the variation in predatory impact across space and time among the various prey groups. Shark tissue stable isotope signatures from Northeast Pacific coastal habitats.
Atlantic Sharpnose Shark Reproductive Biology Data
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Reproductive data from Atlantic sharpnose sharks were collected from specimens captured throughout the northern Gulf of Mexico on various research vessels. Data included those necessary to describe the size at maturity, reproductive cycle, mating period, gestation time and fecundity of the species.