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미국
Gomphid DNA sequence data
DNA sequence data for several genetic loci. This dataset is not publicly accessible because: It's already publicly available on GenBank. It can be accessed through the following means: GenBank/NCBI (http://www.ncbi.nlm.nih.gov/). Accession numbers KX890490-KX891168. Format: This dataset is DNA sequence data. It is available in GenBank. Accession numbers KX890490-KX891168. This dataset is associated with the following publication: Ware, J., E. Pilgrim, M. May, N. Donnelly, and K. Tennessen. Phylogenetic relationships of North American Gomphidae and their close relatives. Systematic Entomology. John Wiley & Sons, Inc., Hoboken, NJ, USA, 42(2): 347-358, (2017).
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연관 데이터
Gomphid DNA sequence data
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DNA sequence data for several genetic loci. This dataset is not publicly accessible because: It's already publicly available on GenBank. It can be accessed through the following means: GenBank/NCBI (http://www.ncbi.nlm.nih.gov/). Accession numbers KX890490-KX891168. Format: This dataset is DNA sequence data. It is available in GenBank. Accession numbers KX890490-KX891168. This dataset is associated with the following publication: Ware, J., E. Pilgrim, M. May, N. Donnelly, and K. Tennessen. Phylogenetic relationships of North American Gomphidae and their close relatives. Systematic Entomology. John Wiley & Sons, Inc., Hoboken, NJ, USA, 42(2): 347-358, (2017).
BioProject
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The BioProject database links to data that have been or will be deposited into archival databases maintained at members of the International Nucleotide Sequence Database Consortium (INSDC, which comprises the DNA DataBank of Japan (DDBJ), the European Nucleotide Archive at European Molecular Biology Laboratory (ENA), and GenBank at the National Center for Biotechnology Information (NCBI)).
기후에너지환경부 국립생물자원관 자생 야생생물의 유전정보
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국립생물자원관에서 생산한 DNA 바코드 서열 관련 자생 야생생물의 유전정보 현황(유전정보관리 번호, 학명, 국명 등) 제공
RefSeq: NCBI Reference Sequence Database
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A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
Trace Archive
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A repository of DNA sequence chromatograms (traces), base calls, and quality estimates for single-pass reads from various large-scale sequencing projects.
Genome Workbench
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An integrated application for viewing and analyzing sequence data. With Genome Workbench, you can view data in publically available sequence databases at NCBI, and mix these data with your own data.
Genome Assembly Data
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A database providing information on the structure of assembled genomes, assembly names and other meta-data, statistical reports, and links to genomic sequence data. Genomes FTP site FAQ at https://www.ncbi.nlm.nih.gov/genome/doc/ftpfaq/
BBGD454: an Online Database for Blueberry Genomic Data Transcriptome analysis of Blueberry using 454 EST sequencing
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,NOTE: This dataset is no longer publicly available.,This database houses over 500,000 sequences that were generated and assembled into approximately 15,000 contigs, annotated and functionally mapped to Gene Ontology (GO) terms.,Blueberry (Vaccinium corymbosum) is a major berry crop in the United States. Next generation sequencing methodologies, such as 454, have been demonstrated to be successful and efficient in producing a snap-shot of transcriptional activities during an organism’s developmental stage(s) or its response to biotic or abiotic stresses. Such application of this new sequencing technique allows for high-throughput, genome-wide experimental verification of known and novel transcripts. We have applied a high-throughput pyrosequencing technology (454 EST sequencing) for transcriptome profiling of blueberry during different stages of fruit development to gain an understanding of the genes that are up or down regulated during this process. We have also sequenced flower buds at four different stages of cold acclimation to gain a better understanding of the genes and biochemical pathways that are up- or down-regulated during cold acclimation, since extreme low temperatures are known to reduce crop yield and cause major losses to US farmers. We have also sequenced a leaf sample to compare its transcriptome profile with that of bud and fruit samples. Over 500,000 sequences were generated and assembled into approximately 15,000 contigs and were annotated and functionally mapped to Gene Ontology (GO) terms. A database was developed to house these sequences and their annotations. A web based interface was also developed to allow collaborators to search\browse the data and aid in the analysis and interpretation of the data. The availability of these sequences will allow for future advances, such as the development of a blueberry microarray to study gene expression, and will aid in the blueberry genome sequencing effort that is underway. This work was supported by grant 2008-51180-04861 from the USDA - Cooperative State Research, Education, and Extension Service (CSREES) Specialty Crop Research Initiative program.,
Genome
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This resource organizes NCBI information, resources, data, and tools and utilities on genomes including sequences, maps, chromosomes, assemblies, and annotations. Sequence and map data from the whole genomes of organisms. The genomes represent both completely sequenced organisms and those for which sequencing is in progress.