HF183/BFDrev and HumM2 qPCR data

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Concentration estimates for HF183/BFDrev and HumM2 qPCR genetic markers in raw sewage collected from 54 geographic locations across the United States. This dataset is associated with the following publication: Boehm, A., J. Soller, and O. Shanks. Human-Associated Fecal qPCR Measurements and Predicted Risk of Gastrointestinal Illness in Recreational Waters Contaminated with Raw Sewage. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 2: 270-275, (2015).

Wanjugi et al 2016 Data Set

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Decomposition data of bacterial and viral fecal indicators in common human pollution types. This dataset is associated with the following publication: Wanjugi, P., M. Sivaganesan, A. Korajkic, C. Kelty, B. McMinn, R. Ulrich, V. Harwood, and O. Shanks. Differential Decomposition of Bacterial and Viral Fecal Indicators in Common Human Pollution Types. WATER RESEARCH. Elsevier Science Ltd, New York, NY, USA, 105: 591-601, (2016).

Stachler et al. 2017 Figure 2 data

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Estimated mean log10 concentration of genetic markers for CQQ_056, CPQ_064, HF183/BacR287, and HumM2 genetic markers in nine sewage and two surface water samples. This dataset is associated with the following publication: Stachler, E., C. Kelty, M. Sivaganesan, X. Li, K. Bibby, and O. Shanks. Quantitative CrAssphage PCR Assays for Human Fecal Pollution Measurement. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 51(16): 9146-9154, (2017).

Stachler et al. 2017 Figure 2 data

공공데이터포털

Estimated mean log10 concentration of genetic markers for CQQ_056, CPQ_064, HF183/BacR287, and HumM2 genetic markers in nine sewage and two surface water samples. This dataset is associated with the following publication: Stachler, E., C. Kelty, M. Sivaganesan, X. Li, K. Bibby, and O. Shanks. Quantitative CrAssphage PCR Assays for Human Fecal Pollution Measurement. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 51(16): 9146-9154, (2017).

Full-Scale qPCR FSI in the Tillamook Bay Watershed April 2019

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Fecal source identification qPCR, land use, and weather data used in the manuscript entitled, "Large-Scale Implementation of Standardized Quantitative Real-Time PCR Fecal Source Identification Procedures in the Tillamook Bay Watershed". This dataset is associated with the following publication: Li, X., M. Sivaganesan, C. Kelty, A. Zimmer-Faust, P. Clinton, J. Reichman, Y. Johnson, W. Matthews, S. Bailey, and O. Shanks. Large-scale implementation of standardized quantitative real-time PCR fecal source identification procedures in the Tillamook Bay Watershed. PLoS ONE. Public Library of Science, San Francisco, CA, USA, 14(6): e0216827, (2019).

Schoen et al 20xx Data Set

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Human-associated genetic marker concentrations in raw sewage. This dataset is associated with the following publication: Schoen, M.E., A.B. Boehm, J. Soller, and O. Shanks. Contamination Scenario Matters when Using Viral and Bacterial Human-Associated Genetic Markers as Indicators of a Health Risk in Untreated Sewage-Impacted Recreational Waters. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 54(20): 13101–13109, (2020).

Brumfield et al 20xx Data Set

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Log10 fecal score ratios for eligible microbial source tracking qPCR assays. This dataset is associated with the following publication: Brumfield, K.D., J.A. Cotruvo, O. Shanks, M. Sivaganesan, J. Hey, N.A. Hasan, A. Huq, R.R. Colwell, and M.B. Leddy. Metagenomic Sequencing and Quantitative Real-Time PCR for Fecal Pollution Assessment in an Urban Watershed. Frontiers in Water. Frontiers, Lausanne, SWITZERLAND, 3: 626849, (2021).

Brumfield et al 20xx Data Set

공공데이터포털

Log10 fecal score ratios for eligible microbial source tracking qPCR assays. This dataset is associated with the following publication: Brumfield, K.D., J.A. Cotruvo, O. Shanks, M. Sivaganesan, J. Hey, N.A. Hasan, A. Huq, R.R. Colwell, and M.B. Leddy. Metagenomic Sequencing and Quantitative Real-Time PCR for Fecal Pollution Assessment in an Urban Watershed. Frontiers in Water. Frontiers, Lausanne, SWITZERLAND, 3: 626849, (2021).

Willis etal 20xx Data Set

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Data set includes measurements used in Figure 2.

Longitudinal Microbial Source Tracking Dataset

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Dataset describes measurements of host-associated qPCR genetic markers along with other water quality parameters and precipitation from samples collected at marine, estuary, and freshwater recreational sites. Additional details provided in attached Dataset Description document. “This research dataset has been reviewed in accordance with U.S. Environmental Protection Agency (U.S. EPA), Office of Research and Development, and approved for release. Mention of brand names or vendors does not constitute an endorsement of products or services by the U.S. EPA.”