This data set contains data that were collected by trained observers aboard Japanese pelagic longline vessels operating in the US EEZ. Observers collected information on the catch, bycatch, and fishing effort details of these fishing operations. Of particular concern were catches of bluefin tuna, and bycatch of marlins.

This data set contains catch and effort for fishing trips that are taken by vessels with a Federal permit issued for the swordfish and sharks under the Highly Migratory Species (HMS) fishery management plan. Fishermen that own vessels with permits in these fisheries are required to complete a vessel logbook for every trip in which any species in the Highly Migratory Species fishery management plans are caught and landed. Fishermen are not required to report fishing trips in which other than these species are caught. However, fishermen are required to submit a no-fishing report if they did not fish for or catch any HMS species during a calendar month. In 1986, the Southeast Fisheries Science Center (SEFSC) initiated a logbook program for vessels that held a federal vessel permit to fish for swordfish in the Atlantic Ocean and Gulf of Mexico. In 1993, a similar program was initiated for vessels with a federal permit to fish for sharks that are included in the HMS fishery management plan. In order to provide sufficient level of detail for fishing effort by the longline vessels, the catch and effort data need to be reported for each longline set. Consequently, a single logbook form was designed for the fishermen to record the catch (numbers of animals caught) and effort, which includes data on the length of the longline, the number of hooks and the duration of the set. To reduce the number of times that fishermen need to record certain pieces of information, e.g., location of unloading, duration of trip, number of crew, a trip summary form was designed in 1999 that includes the trip-related information that is the same for every set. This redesign of the logbook form resulted in two forms, the trip summary and the set forms. Only one trip summary needs to be completed for each trip, but a separate set form needs to be completed for each longline set made during the trip. At the same time, additional questions were added to the trip summary form to collect information on the expenses that the vessels incurred during the trip. Initially, this information was voluntary and the fishermen did not have to provide the cost data whereas the catch and effort data are mandatory and the vessels permit will not be renewed if logbooks are not received for every trip where swordfish and/or sharks are caught and landed.

This data set contains annual quantities and value for all seafood products that are landed and sold by established seafood dealers and brokers in the Southeast Region (North Carolina through Texas). These types of data, referred to as the general canvass landings statistics, have been collected by the NOAA Fisheries Service, National Marine Fisheries Service and its predecessor agency, the Bureau of Commercial Fisheries. The data are available on computer since the early 1960's. The quantities and values that are reported in this data set include the annual landings that were initiated in 1962. Beginning in 1976, the data were collected monthly. See the sections on Links for the reference to the monthly general canvass landings. The annual general canvass landings include quantities and value for all living marine species and are identified by species (usually the local or common name). These data were collected by field agents employed by the National Marine Fisheries Service or the Bureau of Commercial Fisheries and assigned to local fishing ports. The agents contacted the majority of the seafood dealers or brokers in their assigned areas and recorded the quantities and value for each species or species category from the sales receipts maintained by the seafood dealers. In addition, information on the gear and area of capture is available for most of the landings statistics in the data set. Based on their knowledge of the fishing activity in the area, the agents would estimate the type of fishing gear and area where the fishing was likely to have occurred. More detailed information on the caveats associated with these data is provided in the Characteristics, Caveats and Issues section. However, because these data are summaries, they do not contain information on the quantities of fishing effort or identifications of the fishermen or vessels that caught the fish or shellfish.

The Southeast Fisheries Science Center Mississippi Laboratories conducts standardized fisheries independent resource surveys in the Gulf of Mexico, South Atlantic, and U.S. Caribbean to provide abundance and distribution information to support regional and international stock assessments. In 2010, Congress appropriated supplemental funding to expand these surveys in the Gulf of Mexico in response to the Deepwater Horizon oil spill. Bottom longline stations were conducted throughout the northern Gulf of Mexico during 2011. Sampling occurred on multiple contracted fishing vessels simultaneously in the eastern, central and western Gulf of Mexico during all seasons. Data on species-specific catch rates, body lengths and sex were recorded.

The Southeast Fisheries Science Center Mississippi Laboratories conducts standardized fisheries independent resource surveys in the Gulf of Mexico, South Atlantic, and U.S. Caribbean to provide abundance and distribution information to support regional and international stock assessments. In 2015, an experimental longline survey was conducted to provide additional sampling opportunities outside the annual bottom longline survey time frame and standard protocols, including testing the effects of variable bait type, leader material and covering a larger depth range.

Vessel, gear and biological data collected by fishery observers from the commerical Gulf of Mexico menhaden fishery.

The National Marine Fisheries Service (NMFS) began placing observers on foreign fishing vessels operating off the northwest and Alaskan coasts of the United States in 1973, creating the North Pacific Foreign Fisheries Observer Program. Initially, observers were placed on vessels only upon invitation by host countries. In the early years of the program the primary purposes of observers were to determine incidental catch rates of Pacific halibut in groundfish catches and to verify catch statistics in the Japanese crab fishery. Later, observers collected data on the incidence of king crab, snow (Tanner) crab, and Pacific salmon, and obtained biological data on other important species. Following the implementation of the Magnuson Fishery Conservation and Management Act of 1976, which mandated that fishery observers be placed on foreign fishing vessels operating within the US 200-mile Exclusive Economic Zone (EEZ) off the Alaska coast of the Bering Sea and Gulf of Alaska, observer coverage rapidly expanded. By 1986, the foreign fisheries that were not joint-venture were halted.

The Southeast Fisheries Science Center Mississippi Laboratories conducts research and develops gear modifications to mitigate bycatch in fisheries. The data set includes data from three pelagic longline bycatch mitigation research projects, including the Grand Banks sea turtle mitigation research (2002-2003), Gulf of Mexico and Atlantic Cooperative Research Project (CRP, 2005), and Gulf of Mexico bluefin tuna mitigation research (2008-2012). These data were collected in conjunction with the SEFSC Pelagic Observer Program (POP) to augment the existing POP data. This data set contains temperature, depth, and time data taken from Temperature Depth Recorders (TDRs) placed on the gangions along the length of the sets approximately nine meters above the hooks.

The Southeast Fisheries Science Center Mississippi Laboratories conducts standardized fisheries independent resource surveys off the east coast of the United States to provide abundance and distribution information to support regional and international stock assessments. A pilot pelagic longline survey was conducted in 2006 off the U.S. east coast. The objective of the survey was to examine the feasibility of using pelagic longline gear to collect fisheries independent data on stocks of offshore fishes and to establish protocols for future use of data. Additional objectives included examining the distribution and relative abundance of pelagic fishes in the region and to collect biological and environmental data.

The Southeast Fisheries Science Center Mississippi Laboratories conducts standardized fisheries independent resource surveys in the Gulf of Mexico, South Atlantic, and U.S. Caribbean to provide abundance and distribution information to support regional and international stock assessments. The reef fish survey is conducted primarily on the outer continental shelf of the Gulf of Mexico along topographic features (e.g. reefs, banks and ledges) between Brownsville, TX to the Dry Tortugas, FL. A two-stage sampling design is used with the first stage or primary sampling units being blocks 10 minutes of latitude by 10 minutes of longitude and the second stage being randomly selected sites within the blocks. The first-stage units are selected by stratified random sampling, with stratum boundaries defined by geographic region (4 regions: South Florida, Northeast Gulf, Louisiana-Texas Shelf, and South Texas), and by reef habitat area (Blocks < 20 km² reef, Blocks > 20 km² reef). Sampling is conducted using a video camera array, vertical line gear and chevron traps with approximately 400 video cameras, 400 vertical line and 100 traps conducted. The camera array consists of four housings positioned orthogonally and center mounted at a height of 51 cm above the bottom of the array. Each housing contains a pair of black-and-white Videre stereo cameras along with a color mpeg camera. Sampling of reef sites with video cameras occurs only during daylight hours, with the first gear deployment one hour after sunrise and the last gear retrieval one hour prior to sunset. Video arrays soak for 35 minutes. At sites selected for fish sampling, a chevron (or arrow) fish trap or vertical line is used to capture fish for biological samples. The chevron fish trap is constructed with 1.5-inch vinyl-clad mesh. In its greatest dimensions, the trap is 1.76 m in length, 1.52 m in width and 0.61 m in depth. A 0.4 m by 0.29 m blow out panel is placed on one side and kept closed using 7-day magnesium releases. The fish trap soaks for one hour and is baited with squid. The vertical line consists of a mainline with 10 gangions. One 8/0, 11/0 or 15/0 circle hook is attached to each gangion and baited with mackerel (Scomber scombrus). The mainline is soaked for five minutes. Most of the animals captured are measured, weighed, tagged and then released. Those individuals which are moribund or have expired are retained to collect biological data pertaining to the life history of these fishes. Habitat mapping is conducted using the SIMRAD ME70 multibeam echosounder. At each site hydrological data is collected using Conductivity Temperature Depth sensor (CTD).