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NRSA 2013-2014 ARG Dataset
ARG, intI1, fecal indicator bacteria PCR data. This dataset is associated with the following publication: Keely, S., N. Brinkman, E. Wheaton, M. Jahne, S. Siefring, M. Varma, R. Hill, S. Leibowitz, R. Martin, J. Garland, and R. Haugland. Geospatial Patterns of Antimicrobial Resistance Genes in the US EPA National Rivers and Streams Assessment Survey. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 56(21): 14960–14971, (2022).
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연관 데이터
NRSA 2013-2014 ARG Dataset
공공데이터포털
ARG, intI1, fecal indicator bacteria PCR data. This dataset is associated with the following publication: Keely, S., N. Brinkman, E. Wheaton, M. Jahne, S. Siefring, M. Varma, R. Hill, S. Leibowitz, R. Martin, J. Garland, and R. Haugland. Geospatial Patterns of Antimicrobial Resistance Genes in the US EPA National Rivers and Streams Assessment Survey. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 56(21): 14960–14971, (2022).
ARG Summarized Data2
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ARG and environmental parameters data collected at Proctor Creek, Atlanta, GA from 2015-2017. This dataset is associated with the following publication: Sowah, R., M. Molina, O. Georgacopoulos, B. Snyder, and M. Cyterski. Sources and Drivers of ARGs in Urban Streams in Atlanta, Georgia, USA. Microorganisms. MDPI, Basel, SWITZERLAND, 10(9): 1804, (2022).
ARGs in Kewaunee County Riverbed Sediment and Surface Water: Data from Beattie et al. 2018
공공데이터포털
The relative abundance of antibiotic resistance genes measured from spatially and temporally distributed sampling in Kewaunee County, Wisconsin.
CRE wastewater survey
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Isolates listed by unique identifiers and levels of resistance to various antibiotics. This dataset is associated with the following publication: Hoelle, J., J.R. Johnson, B. Johnston, B. Kinkle, L. Boczek, H. Ryu, and S. Hayes. Survey of US wastewater for carbapenem-resistant Enterobacteriaceae. JOURNAL OF WATER AND HEALTH. IWA Publishing, London, UK, 17(2): 219-226, (2019).
CRE wastewater survey
공공데이터포털
Isolates listed by unique identifiers and levels of resistance to various antibiotics. This dataset is associated with the following publication: Hoelle, J., J.R. Johnson, B. Johnston, B. Kinkle, L. Boczek, H. Ryu, and S. Hayes. Survey of US wastewater for carbapenem-resistant Enterobacteriaceae. JOURNAL OF WATER AND HEALTH. IWA Publishing, London, UK, 17(2): 219-226, (2019).
Data from: Draft genome sequences of eight streptogramin-resistant Enterococcus species isolates from animal and environmental sources in the United States
공공데이터포털
,Draft genome sequences of five Enterococcus faecium, two Enterococcus hirae, and one Enterococcus gallinarum from enviromental sources and chicken carcass rinsates. Isolates were selected for their resistance to the streptogramin antibiotic, Quinupristin-Dalfopristin and were all collected in the United States between 2001 and 2004. Antimicrobial resistance genes were identified conferring resistance to the macrolide-lincosamide-streptogramins, aminoglycosides, tetracycline, beta-lactams, and glycopeptides.,,
Resilience of Microbial Communities Sequence Data Set
공공데이터포털
The EX_Genome_Assemblies.zip file contain the contig sequences (i.e. assembly) of fifteen isolates used for genomic and antibiotic resistance genes (ARG) analysis. EX_OTU.fasta file contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the following publication: Gomez-Alvarez, V., S. Pfaller, J. Pressman, D. Wahman, and R. Revetta. Resilience of microbial communities in a simulated drinking water distribution system subjected to disturbances: role of conditionally rare taxa and potential implications for antibiotic-resistant bacteria. Environmental Science: Water Research & Technology. Royal Society of Chemistry, Cambridge, UK, 2: 645-657, (2016).
Resilience of Microbial Communities Sequence Data Set
공공데이터포털
The EX_Genome_Assemblies.zip file contain the contig sequences (i.e. assembly) of fifteen isolates used for genomic and antibiotic resistance genes (ARG) analysis. EX_OTU.fasta file contain the sequences of the bacterial 16S rRNA-encoding V4 region gene (≈250 nt) for each Operational Taxonomic Unit (OTU). This dataset is associated with the following publication: Gomez-Alvarez, V., S. Pfaller, J. Pressman, D. Wahman, and R. Revetta. Resilience of microbial communities in a simulated drinking water distribution system subjected to disturbances: role of conditionally rare taxa and potential implications for antibiotic-resistant bacteria. Environmental Science: Water Research & Technology. Royal Society of Chemistry, Cambridge, UK, 2: 645-657, (2016).
Data for Validation and Application of Standardized Quantitative PCR Assay for the Assessment of Antimicrobial Resistance Genes in Surface Water
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This data set describes results for two laboratory experiments to validate a quantitative PCR assay for the assessment of antimicrobial resistance genes in surface waters. Data are also provided for the application of the assay surface water samples collected from three national parks in Alaska.