데이터셋 상세
미국
Data from: Draft genome sequences of eight streptogramin-resistant Enterococcus species isolates from animal and environmental sources in the United States
,Draft genome sequences of five Enterococcus faecium, two Enterococcus hirae, and one Enterococcus gallinarum from enviromental sources and chicken carcass rinsates. Isolates were selected for their resistance to the streptogramin antibiotic, Quinupristin-Dalfopristin and were all collected in the United States between 2001 and 2004. Antimicrobial resistance genes were identified conferring resistance to the macrolide-lincosamide-streptogramins, aminoglycosides, tetracycline, beta-lactams, and glycopeptides.,,
데이터 정보
연관 데이터
Genome sequencing of Staphylococcus, Burkholderia, and Ralstonia bacterial isolates isolated from the ISS
공공데이터포털
This repository holds genome assemblies for Staphylococcus, Burkholderia, and Ralstonia bacterial isolates isolated from the ISS between the years of 2006-2015. Information on the overall microbial isolation effort is stored under NASA's Life Science Data Archive experiment 13823 (https://lsda.jsc.nasa.gov/Experiment/exper/13823). For the genomes presented here, isolates were received from NASA's Johnson Space Center and their genomes were sequenced and assembled thanks to NASA Space Biology awards to Michael D. Lee (NNH16ZTT001N-MOBE) and Aubrie O'Rourke (80NSSC17K0035).
Data from: Genome sequence resource of Streptomyces spp. from agricultural soil that inhibit Verticillium dahliae
공공데이터포털
,Annotation data of genome assemblies of Streptomyces spp. isolated from agricultural soil.,,
NRSA 2013-2014 ARG Dataset
공공데이터포털
ARG, intI1, fecal indicator bacteria PCR data. This dataset is associated with the following publication: Keely, S., N. Brinkman, E. Wheaton, M. Jahne, S. Siefring, M. Varma, R. Hill, S. Leibowitz, R. Martin, J. Garland, and R. Haugland. Geospatial Patterns of Antimicrobial Resistance Genes in the US EPA National Rivers and Streams Assessment Survey. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 56(21): 14960–14971, (2022).
NRSA 2013-2014 ARG Dataset
공공데이터포털
ARG, intI1, fecal indicator bacteria PCR data. This dataset is associated with the following publication: Keely, S., N. Brinkman, E. Wheaton, M. Jahne, S. Siefring, M. Varma, R. Hill, S. Leibowitz, R. Martin, J. Garland, and R. Haugland. Geospatial Patterns of Antimicrobial Resistance Genes in the US EPA National Rivers and Streams Assessment Survey. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 56(21): 14960–14971, (2022).
Data from: The Biology of IncI2 Plasmids Shown by Whole-Plasmid Multi-Locus Sequence Typing
공공데이터포털
,DNA sequences of each allele for 165 loci found in a population of 147 fully sequenced IncI2 plasmids with allelic identifiers.,Data is based on whole-genome sequences in the National Center for Biotechnology Information database as of July, 2017.,Resources in this dataset:,,
Data from: Bacterial communities and prevalence of antibiotic resistance genes carried within house flies (Diptera: Muscidae) associated with beef and dairy cattle farms
공공데이터포털
,House flies (Musca domestica L.) are vectors of human and animal pathogens at livestock operations. Microbial communities in flies are acquired from, and correlate with, their local environment. However, variation among microbial communities carried by flies from farms in different geographical areas is not well understood. We characterized bacterial communities of female house flies collected from beef and dairy farms in Oklahoma, Kansas, and Nebraska and further evaluated the prevalence of antibiotic resistance genes in bacteria within flies. We evaluated the influence of farm type and farm location on bacterial communities, diversity, pathogenic bacteria strains and prevalence of antibiotic resistance genes. These data can be used for better understanding of abundance and prevalence of bacterial communities in house flies associated with livestock operations. These data were collected in September 2019. Abbreviations used include Operational Taxonomic Units(OTUs), Canonical Correspondence analysis (CCA), Infectious Bovine Keratoconjunctivitis (IBK), Anti Microbial Resistance (AMR), and Antibiotic Resistance Genes (ARGs).,The raw Illumina MiSeq sequence data for this project can be found here: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA863664,Resources in this dataset:,
목록