Interactive effects of biochar amendment and lead toxicity on soil microbial community

공공데이터포털

Supplementary material for manuscript. GenBank Accession numbers to DNA sequences obtained and used. Taxonomy of OTUs - large txt file tab delimited Number of sequences per OTU per Sample - large txt file tab delimited. This dataset is associated with the following publication: Wan, Y., R. Devereux, S. George, J. Chen, B. Gao, M. Noerpel, and K. Scheckel. Interactive effects of biochar amendment and lead toxicity on soil microbial community. JOURNAL OF HAZARDOUS MATERIALS. Elsevier Science Ltd, New York, NY, USA, 425: 127921, (2022).

Biochar Pb Bioaccessibility

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Data describes the impact of biochar amendments on soil lead bioaccessibility. It contains the raw soil bioaccessibility information. This dataset is associated with the following publication: Plunkett, S., C. Eckley, T. Luxton, and M. Johnson. The effects of biochar and redox conditions on soil Pb bioaccessibility to people and waterfowl. CHEMOSPHERE. Elsevier Science Ltd, New York, NY, USA, 294: 133675, (2022).

Bioavailability and speciation data

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The files in the dataset include tables of Pb bioavailability data from mice studies, of Pb x-ray absorption near-edge structure spectroscopy data, and of Pb speciation results of diets and excreted Pb. This dataset is associated with the following publication: Karna, R.R., M.P. Noerpel, C. Nelson, B. Elek, K. Herbin-Davis, G. Diamond , K. Bradham, D.J. Thomas, and K.G. Scheckel. Bioavailable soil Pb minimized by in situ transformation to plumbojarosite. PNAS (PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES). National Academy of Sciences, WASHINGTON, DC, USA, 118(3): 01-06, (2021).

Bioavailability and speciation data

공공데이터포털

The files in the dataset include tables of Pb bioavailability data from mice studies, of Pb x-ray absorption near-edge structure spectroscopy data, and of Pb speciation results of diets and excreted Pb. This dataset is associated with the following publication: Karna, R.R., M.P. Noerpel, C. Nelson, B. Elek, K. Herbin-Davis, G. Diamond , K. Bradham, D.J. Thomas, and K.G. Scheckel. Bioavailable soil Pb minimized by in situ transformation to plumbojarosite. PNAS (PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES). National Academy of Sciences, WASHINGTON, DC, USA, 118(3): 01-06, (2021).

Microbial Community Analysis based on 16S rRNA gene of Sediment Layers

공공데이터포털

A table (DP_OTU.xlsx) contains rows as OTUs, columns as samples, and entries representing the abundance of each OTU. This dataset is associated with the following publication: Gomez-Alvarez, V., H. Liu, J. Pressman, and D. Wahman. Metagenomic Profile of Microbial Communities in a Drinking Water Storage Tank Sediment after Sequential Exposure to Monochloramine, Free Chlorine, and Monochloramine. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 1(5): 1283-1294, (2021).

Microbial Community Analysis based on 16S rRNA gene of Sediment Layers

공공데이터포털

A table (DP_OTU.xlsx) contains rows as OTUs, columns as samples, and entries representing the abundance of each OTU. This dataset is associated with the following publication: Gomez-Alvarez, V., H. Liu, J. Pressman, and D. Wahman. Metagenomic Profile of Microbial Communities in a Drinking Water Storage Tank Sediment after Sequential Exposure to Monochloramine, Free Chlorine, and Monochloramine. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 1(5): 1283-1294, (2021).

Soil microbial indicators of soil amendments

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soil microbial populations and enzyme assays that show responses of the soil microbial community to soil amendments. This dataset is not publicly accessible because: Link to data is not available now. It can be accessed through the following means: USDA - ARS will have the link to the data at some point. Format: Likely to be an excel file and avialble as a public link in the future. This dataset is associated with the following publication: Ducey, T.F., J.M. Novak, G.C. Sigua, J.A. Ippolito, H.C. Rushmiller, D.W. Watts, K.M. Trippe, K.A. Spokas, K.C. Stone, and M. Johnson. Microbial Response to Designer Biochar and Compost Treatments for Mining Impacted Soils. Biochar Journal. Ithaka Institute for Carbon Intelligence, Arbaz, SWITZERLAND, 3: 299-314, (2021).

Microbial communities of fecal samples from a mouse model with ingestion of lead contaminated soils with four treatment amendments. The data set includes relative abundance and taxonomy.

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The data set involved mice consumed diets amended with a lead-contaminated soil in its native (untreated) state or after treatment with phosphoric acid or triple superphosphate alone or in combination with iron-waste material or biosolids compost. This dataset is associated with the following publication: George, S., J. James, R. Devereux, Y. Wan, G. Diamond, K. Bradham, K. Scheckel, and D. Thomas. Ingestion of Remediated Lead-Contaminated Soils Affects the Fecal Microbiome of Mice. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 837: 155797, (2022).

Biological mapping and speciation analysis examines origin and fate of lead species in soil before and after remediation to promote plumbojarosite formation

공공데이터포털

X-ray absorption spectroscopy raw data files. This dataset is associated with the following publication: Sowers, T., S. Bone, M. Noerpel, M. Blackmon, R. Karna, K. Scheckel, A. Juhasz, G. Diamond, D. Thomas, and K. Bradham. Plumbojarosite Remediation of Soil Affects Lead Speciation and Elemental Interactions in Soil and in Mice Tissues. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 55(23): 15950-15960, (2021).

Biological mapping and speciation analysis examines origin and fate of lead species in soil before and after remediation to promote plumbojarosite formation

공공데이터포털

X-ray absorption spectroscopy raw data files. This dataset is associated with the following publication: Sowers, T., S. Bone, M. Noerpel, M. Blackmon, R. Karna, K. Scheckel, A. Juhasz, G. Diamond, D. Thomas, and K. Bradham. Plumbojarosite Remediation of Soil Affects Lead Speciation and Elemental Interactions in Soil and in Mice Tissues. ENVIRONMENTAL SCIENCE & TECHNOLOGY. American Chemical Society, Washington, DC, USA, 55(23): 15950-15960, (2021).