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Pd qPCR Interlaboratory Testing Results
These data were collected as part of a voluntary initiative to create a White-Nose Syndrome Diagnostic Laboratory Network among laboratories participating in research and surveillance for Pseudogymonascus destructans (Pd) - the fungal pathogen causing White-Nose Syndrome in bats. Pd_qPCR_InterlaboratoryLODdata.xlsx is raw qPCR data from multiple laboratories running serial dilutions of Pd gBlock in known concentrations for the collectively used Muller (2013) Pd qPCR assay. Pd_qPCR_InterlaboratoryResults_LOD.xlsx contains the data output for each laboratory from running a generic LOD/LOQ calculator script. the generic LOD/LOQ calculator script is available at:https://github.com/cmerkes/qPCR_LOD_Calc. Pd_qPCR_InterlaboratoryPTResults_PanelData.xlsx contains the raw qPCR data from multiple laboratories running blinded samples spiked with known concentrations of Pd conidia. Each sample was extracted once and run in triplicate using the Muller (2013) assay. Pd_qPCR_InterlaboratoryPTResults_PanelResults contains the results of the blinded samples in each laboratory panel as both qPCR Ct values per replicate, and final overall sample result according to the WNS Case Definition. Pd_qPCR_InterlaboratoryPTResults_Standards.xlsx contains the results of the standard curves run by each laboratory in conjunction with the blinded sample panel.
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Pd qPCR Interlaboratory Testing Results
공공데이터포털
These data were collected as part of a voluntary initiative to create a White-Nose Syndrome Diagnostic Laboratory Network among laboratories participating in research and surveillance for Pseudogymonascus destructans (Pd) - the fungal pathogen causing White-Nose Syndrome in bats. Pd_qPCR_InterlaboratoryLODdata.xlsx is raw qPCR data from multiple laboratories running serial dilutions of Pd gBlock in known concentrations for the collectively used Muller (2013) Pd qPCR assay. Pd_qPCR_InterlaboratoryResults_LOD.xlsx contains the data output for each laboratory from running a generic LOD/LOQ calculator script. the generic LOD/LOQ calculator script is available at:https://github.com/cmerkes/qPCR_LOD_Calc. Pd_qPCR_InterlaboratoryPTResults_PanelData.xlsx contains the raw qPCR data from multiple laboratories running blinded samples spiked with known concentrations of Pd conidia. Each sample was extracted once and run in triplicate using the Muller (2013) assay. Pd_qPCR_InterlaboratoryPTResults_PanelResults contains the results of the blinded samples in each laboratory panel as both qPCR Ct values per replicate, and final overall sample result according to the WNS Case Definition. Pd_qPCR_InterlaboratoryPTResults_Standards.xlsx contains the results of the standard curves run by each laboratory in conjunction with the blinded sample panel.
Data from the development and evaluation of a CRISPR/Cas12a-based biosensor for the detection of DNA from Pseudogymnoascus destructans using samples collected from various species of bats across the United States, from 2018 to 2023
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Reported here are the fluorescence data points recorded from CRISPR/Cas12a biosensor assays to detect the presence or absence of DNA from Pseudogymnoascus destructans (Pd), the causative fungal agent of white-nose syndrome in bats, from artificial controls, dermal swab, and guano samples. Ct values from qPCR experiments are also provided in a table. Furthermore, we also provide the GenBank accession numbers used to develop the aforementioned CRISPR/Cas12a biosensor assay for Pd DNA detection.
Data from the development and evaluation of a CRISPR/Cas12a-based biosensor for the detection of DNA from Pseudogymnoascus destructans using samples collected from various species of bats across the United States, from 2018 to 2023
공공데이터포털
Reported here are the fluorescence data points recorded from CRISPR/Cas12a biosensor assays to detect the presence or absence of DNA from Pseudogymnoascus destructans (Pd), the causative fungal agent of white-nose syndrome in bats, from artificial controls, dermal swab, and guano samples. Ct values from qPCR experiments are also provided in a table. Furthermore, we also provide the GenBank accession numbers used to develop the aforementioned CRISPR/Cas12a biosensor assay for Pd DNA detection.
Pseudogymnoascus destructans detections by US county (2008-2012)
공공데이터포털
This data represents the number of positive and negative Pd (Pseudogymnoascus destructans) detections by county over the sampling period 2008-2012. Pd is the fungus that is the causative agent of white-nose syndrome.
Pseudogymnoascus destructans detections by US county (2008-2012)
공공데이터포털
This data represents the number of positive and negative Pd (Pseudogymnoascus destructans) detections by county over the sampling period 2008-2012. Pd is the fungus that is the causative agent of white-nose syndrome.
Pre- and post-White-nose Syndrome Bat Capture Models
공공데이터포털
These data are the collection of generalized linear mixed models run for AIC comparison of the pre- and post-White-nose Syndrome bat mist-net captures and percent juveniles in capture by year, time since White-nose Syndrome at collection set, U.S Fish and Wildlife Service designated geographic units, states or NABAT grid cell, collection site mean temperature, collection site temperature range and collection site elevation. Models are inclusive of data from 1999-2019 for the little brown bat (Myotis lucifugus), northern long-eared bat (Myotis septentrionalis) and the tri-colored bat (Perimyotis subflavus).
Pre- and post-White-nose Syndrome Bat Capture Models
공공데이터포털
These data are the collection of generalized linear mixed models run for AIC comparison of the pre- and post-White-nose Syndrome bat mist-net captures and percent juveniles in capture by year, time since White-nose Syndrome at collection set, U.S Fish and Wildlife Service designated geographic units, states or NABAT grid cell, collection site mean temperature, collection site temperature range and collection site elevation. Models are inclusive of data from 1999-2019 for the little brown bat (Myotis lucifugus), northern long-eared bat (Myotis septentrionalis) and the tri-colored bat (Perimyotis subflavus).
Pre-Amplifcation qPCR Ceratocystis DNA Detections
공공데이터포털
The data contain the raw quantitative polymerase chain reaction (qPCR) results after pre-amplification by polymerase chain reaction for all Ceracystis lukuohia and huliohia testing of environmental DNA (eDNA) collected in Passive Environmental Samplers (PES).
Pre-Amplifcation qPCR Ceratocystis DNA Detections
공공데이터포털
The data contain the raw quantitative polymerase chain reaction (qPCR) results after pre-amplification by polymerase chain reaction for all Ceracystis lukuohia and huliohia testing of environmental DNA (eDNA) collected in Passive Environmental Samplers (PES).
Virally-vectored vaccine candidates against white-nose syndrome induce anti-fungal immune response in little brown bats (Myotis lucifugus)
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White-nose syndrome (WNS) caused by the fungus, Pseudogymnoascus destructans (Pd) has killed millions of North American insect-eating bats. Currently, methods to prevent the disease are limited. We conducted two trials to assess potential WNS vaccine candidates in wild-caught Myotis lucifugus. In a pilot study, we immunized bats with one of four vaccine treatments or PBS as a control and challenged them with Pd upon transfer into hibernation chambers. Bats in one vaccine-treated group, that received raccoon poxviruses (RCN) expressing Pd calnexin (CAL) and serine protease (SP), developed WNS at a lower rate (1/10) than other treatments combined (14/23), although samples sizes were small. The results of a second similar trial provided additional support for this observation. Bats vaccinated orally or by injection with RCN-CAL and RCN-SP survived Pd challenge at a significantly higher rate (P = 0.01) than controls. Using RT-PCR and flow cytometry, combined with fluorescent in situ hybridization, we determined that expression of IFN-γ transcripts and the number of CD4+ T-helper cells transcribing this gene were elevated (P <0.10) in stimulated lymphocytes from surviving vaccines (n=15) compared to controls (n=3). We conclude that vaccination with virally-vectored Pd antigens induced antifungal immunity that could potentially protect bats against WNS.